Gene Information

Name : Plav_3422 (Plav_3422)
Accession : YP_001414682.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3658073 - 3659482 bp
Length : 1410 bp
Strand : +
Note : KEGG: rme:Rmet_2351 putative secreted protein

DNA sequence :
ATGCGCAGTAACGGACTCCTGAAGTGGCTGATGATCCCAGTGGCCCTCCTGGTGCTGTTCATCGGCGTCCGTCTGTTCTC
GGGCGGCGGACCTTCGACACTTTCCCAAGCCGACGCGGGGAGCCAGCTCACGCCCGAAGAGATGAAGGCGCTGGGCATCG
AGGGCGATACCCCGCGCGATACCGTCGCCACGCTGGTCGCGCAGGTCAAGCAACTGCGCACCGAGCTTCAGACCGCGCTG
TCCGACAACAAGTCTCAGCGCGAGGAAAACCAACGCCTGCGCCAGCGCGAGAACTCGATCGATCAGCGCATCAACGCCGC
GCTCGAAGCCGAGCGTTCCAACCTGCGGCGCGACCAGCAGCAAGCCGCGAGCGAGCGCCAGCAAACCGAAGGCTTGCTCG
CGGACTTGCAGCGACGCCTGGAGGCGATCGGCGGTCGTGGCGGCGGCCATGCCGACCTGCCGGTGGGCCTGGGACTGCGC
GACGGCGACGAGGCCGGGATGGAAGGCGGCGTGCGCTGGGTGGAACCGGACGACGCGAAGAAGGCTGAGGCGCGCGGCTC
GTCCAGTGGCGCCATGAGCTTTCCGACGAGCTTTGGACCGGCGCAGCGCACGCTGGAAACCACGGCGGAAACCGTGGCGA
ACGCGGGCGCACGCGCCGCCGGCGTCAAGACCGCCAAGGCTGTTTATACGGTTCCGACAAACTCCACCCTCATGGGATCG
GTGGCGATGACCGCGCTAATCGGCCGTGTGCCGATCGACGGCACCGTGAACGACCCGTACCCCTTCAAAGTCCTGGTGGG
CCCCGACAACCTCACGGCCAACGGCATCGATATTCCCGACGTGGCGGGCGCCGTGTTCAGCGGCACAGCCTCGGGCGACT
GGACGCTCTCGTGCGTGCGCGGCCAGGTGCGCAGCATTACGTTCGTCTTTCATGACGGAACCATCCGCACCATTCCCGAG
GACCGCGAGGGCAACCAGCAGAACAACCAGCAACGCGATGGCCTGGGCTGGATCAGCGATCCCTATGGCATTCCCTGCGT
CAGTGGGGAGCGGCGCAGCAACGCCCAGCAGTACCTCGGTTCGCAGGCCCTGATCACCGCGGCCGGTGCCGGCGTGGCCT
CGCTCATCGAAAGCGACAGCGGCCAGATGTCCTACGTCGGCTCGGACGGCTCCATCGGCACTGTGGGCATCAGTGGTCAG
GAGGCCGTGGGCCGGATTCTCGCCGGTGGCGTCCAGGAAATGTCGAACTGGGTCAACAAGCTCTACGGGCAGGCCTTCGC
CGCCGTCTATGTGCAGCCCGGCGCGAAAGTCGCTGTCCACCTCGAAAAACCCCTTGCCATCGACTTCGACCCCGAGGGTC
GCAAGGTCGATCACCGCGCAGGAGAAAGCCATGCTCTCGAACTTGACTGA

Protein sequence :
MRSNGLLKWLMIPVALLVLFIGVRLFSGGGPSTLSQADAGSQLTPEEMKALGIEGDTPRDTVATLVAQVKQLRTELQTAL
SDNKSQREENQRLRQRENSIDQRINAALEAERSNLRRDQQQAASERQQTEGLLADLQRRLEAIGGRGGGHADLPVGLGLR
DGDEAGMEGGVRWVEPDDAKKAEARGSSSGAMSFPTSFGPAQRTLETTAETVANAGARAAGVKTAKAVYTVPTNSTLMGS
VAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRTIPE
DREGNQQNNQQRDGLGWISDPYGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGQMSYVGSDGSIGTVGISGQ
EAVGRILAGGVQEMSNWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRAGESHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 92
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-147 72
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 4e-107 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-107 49
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 8e-103 49
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 8e-106 48
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 1e-79 42
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 1e-80 42
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 4e-74 42
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-76 41
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 3e-77 41
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 7e-78 41