Gene Information

Name : Plav_3421 (Plav_3421)
Accession : YP_001414681.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3657157 - 3658083 bp
Length : 927 bp
Strand : +
Note : KEGG: xcv:XCV2370 putative secreted protein

DNA sequence :
ATGAAGCACTCCTTACAGCATTACTCCCTCGCCTTGCTGGGGCTGCTGGCCGTGGCCTTGGCATCTGCGGCCCAGGCGGT
GGAGATCCTGCGCTGGGAGCGCATGCCGCTGGCCGTTCCCCTGAAGGTCGGCCAGGAGCGCATTGTGTTCATCGACCGGA
ACGTGCGCGTGGGCGTGCCGGCCGCCGTGGGCGAGCGCCTGCGGGTGCAGAGCGCGGGCGGCGCGGTGTACCTGCGCGCC
AGCGAGCCAATCGAGCCCGCACGGCTGCAACTGCAAGACGCCGACACGGGCGCATTGATCCTGCTGGACATTGCGGCCGA
GCCGCCCAAGGACGGCGAAGCGGAGCTGGAGCCGGTGCGCATCGTCGAGGGCAATACCGCTTCAGCGCGCTATGGCGGTC
AGCCAGCGGGCGCCGATAAAGTGTCGGCACGCTCTGGTGATTCGACGGGCGCGCCGCCGGCCCGGCGCGAAACGCCGGTC
GCGGTCGTGCTGACGCGGTTTGCCGCGCAGAACCTGTACGCACCGCTGCGTACGGTTGAGCCACTTGCGGGCGTGATGCG
CGTCAACCTGCGCCGCAACCTGGACCTCGGCACGCTGATGCCGACGTTGTCGGTGCGCGCCGTCGCGCTCGCATCCTGGC
GCTTGGAGGATCAGTGGGTCACTGCCGTGCGTCTCACGAACAGCAGTGCCGCCTGGATCACGCTCGACCCGCGCGTGCTG
CAAGGCGATTTCCTCACCGCCACTTTCCAGCATGAGGCGTTGGGCCCGCGCGGCACACCGGAGGACACCACCACCGTGTA
CCTGGTAACGCGCGGGCGGGGCCTTGCGCAATCGCTGCTGCCCGCCATTCACCGCTTCGACCCGGCCGTGCATCTGCCGC
AACCGAATGCGGATGAGAACGGCAAGGAGGCCCGTCATGCGCAGTAA

Protein sequence :
MKHSLQHYSLALLGLLAVALASAAQAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAAVGERLRVQSAGGAVYLRA
SEPIEPARLQLQDADTGALILLDIAAEPPKDGEAELEPVRIVEGNTASARYGGQPAGADKVSARSGDSTGAPPARRETPV
AVVLTRFAAQNLYAPLRTVEPLAGVMRVNLRRNLDLGTLMPTLSVRAVALASWRLEDQWVTAVRLTNSSAAWITLDPRVL
QGDFLTATFQHEALGPRGTPEDTTTVYLVTRGRGLAQSLLPAIHRFDPAVHLPQPNADENGKEARHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-114 87
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 8e-74 63
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-73 60
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-73 60
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-72 59
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 4e-77 56
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 1e-51 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 1e-51 50
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 2e-52 48
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 7e-52 48
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-52 48
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 1e-52 48
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-49 45