Gene Information

Name : Plav_3420 (Plav_3420)
Accession : YP_001414680.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3656471 - 3657160 bp
Length : 690 bp
Strand : +
Note : KEGG: xcb:XC_2035 hypothetical protein

DNA sequence :
ATGAGCCGTTTCAAGAACGAGATCACCCACCTGCAGGCGCACATTAAGACGCTGCGCCTGGGCGCGGGCGCGCTGGTCAT
CGTCGCGCTGGTCATGGGTGGCGGTTGGTGGAGTGCCCCGCGCGATCTGACCATCCACGTCCCGCCTGACCTGCGCTCCG
GCAGCACCCGCAAGTGGTGGGAAGTGCCACCCGAATCGGTCTATGCCTTCACGTTCTACGTGTTCCAGCAGCTCAACCGC
TGGCCGACCAATGGCGAGGAAGACTACCCGCGCAACCTGCACGCGCTCTCGCCATACCTCACGCCAGCCTGTCACGCCTT
TCTGCGTGCCGACTACGACTACCGGCGCAGCACCGGCGAGCTGCGCCAGCGCGTGCGCGGCATCTATGAAATCCCGGGCC
GTGGTTATGGCGACGATCCCACCGCCCGCGTGCGCGTCGTCTCCGACCGCGACTGGGTGGTGACGCTAGACATCAGCGCC
GACGAGTATTACGGCGCTGAGCAGGTCAAGCGCGCCCTGGTGCGCTACCCCATCAAAGTCACGCGGGTGGACGTCGATCC
CTCACGCAACCCGTTCGGCCTGGCGCTCGATTGCTACGACGGCACGCCCCAGCGCATCAACGTCCCGGAGCCGACGCGCC
CGACATCTGGCAGGTTGCCTTCGCAAGCGCCTCAAGGAGAAACCCCATGA

Protein sequence :
MSRFKNEITHLQAHIKTLRLGAGALVIVALVMGGGWWSAPRDLTIHVPPDLRSGSTRKWWEVPPESVYAFTFYVFQQLNR
WPTNGEEDYPRNLHALSPYLTPACHAFLRADYDYRRSTGELRQRVRGIYEIPGRGYGDDPTARVRVVSDRDWVVTLDISA
DEYYGAEQVKRALVRYPIKVTRVDVDPSRNPFGLALDCYDGTPQRINVPEPTRPTSGRLPSQAPQGETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C51 AAN62145.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-93 91
ORF SG61 AAN62283.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-79 76
pph80 CAI36121.1 hypothetical protein Not tested PPHGI-1 Protein 1e-63 60
api35 CAF28509.1 putative exported protein Not tested YAPI Protein 8e-56 57
PMI2581 YP_002152300.1 hypothetical protein Not tested Not named Protein 8e-54 56
STY4568 NP_458653.1 possible exported protein Not tested SPI-7 Protein 6e-53 56
t4265 NP_807863.1 hypothetical protein Not tested SPI-7 Protein 6e-53 56
YpsIP31758_3709 YP_001402663.1 hypothetical protein Not tested YAPI Protein 2e-55 54
EXA37 ABD94646.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-52 54
RL026 AAP84153.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-52 54
unnamed ABR13366.1 hypothetical protein Not tested PAGI-5 Protein 8e-53 54
YE3486 YP_001007645.1 hypothetical protein Not tested YAPI Protein 2e-54 53
Pmu_03110 YP_005176210.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 8e-43 47