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Name : Plav_3405 (Plav_3405) Accession : YP_001414665.1 Strain : Parvibaculum lavamentivorans DS-1 Genome accession: NC_009719 Putative virulence/resistance : Unknown Product : helicase domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 3641831 - 3644110 bp Length : 2280 bp Strand : + Note : PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: har:HEAR1996 putative helicase from plasmid origin DNA sequence : ATGTCCCTCGATCTTGAATCTACTGCCGCAGAAGCCACTCCCGTGCAGGGTGAACTGCTCGACGCGGCACCTTCTCCTCT GACCCTGAGCCTTCAGGATTTCGTCGGTGAGTTCGGCGACGAATTGCTGGACTCTCTCAATCGGGCTAACCCGCCGGTCT ATACCGGCCAGCCACAGGCGCACCGCCAGCTCATCGTCGCCAGCCTCAAACGCAAGCTGTTTGAGGCCCAGGCCGAAGTC GTCTATGCCGCCGCCGAGCTGCTGGTCGATCGTGGCGAACGCGCCGCGATCGTTAATGGCGAGATGGGGTGCGGCAAGAC GACCGTCGGCATCGCCACGGCCGCCGTCCTCAACGCCGAAGGCTACCGCCGCACCCTGGTGCTTTCGCCGCCACACCTGG TTTACAAGTGGCGACGCGAGATCCAGGAGACGGTGACGGGCGCCAAGGTCTGGGTCCTCAATGGTCCGGATACCCTCGTC AAACTTATCAGGCTGCGCGAGCAGTTGGGTGTGCAGCCCACGGGCCAGGAGTTCTATGTCCTGGGGCGCGTCAGGATGCG GATGGGGTTCCATTGGAAGCCTGTCTTCACCCGGCGGCGCACCCGCCACGGAGACGTGGCGGCCTGCCCGGACTGCGGCA CTGTCATCACCGACCTTGACGGCGAGCCGGTCAACCCGATCGCACTCGAAGCCGAGGAGTACCGCAGGAAGTGCAGCCAT TGCGCCGCGCCCTTGTGGACGCTGATCCGTCCGAGAAGCCTGTCCGGCAGTGACCAGTCCTCGGCTGTCCTCAAAGCCTT GAAGCGCATCCCGACCATCGGGGAAGTCACCGCGCAGAGGCTGATGCAGAAGTTCGGTGATGGCTTCCTGGCCTCGATGC TGGGCGACAACATCCATGAGTTCATCAACCTCATGGATGGCAGCGGCGAGCTGGTGTTTTCCGACCGTCAGGCCACGCGC ATGGAACGTGCGATGGCCAACATGGAGTTCGGCTTCGGCGAGGGCGGCTACCAGCCGTCCGAGTTCATCAAGCGCTACCT ACCGCAAGGCACGTTCGACCTGCTCATCGCCGACGAGGCACACGAGTACAAGAACGGCGGAAGCGCCCAGGGCCAGGCCA TGGGCGTGTTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGCTGATGGGCGGCTACGGCGACGACCTGTTC TACCTGCTGTTCCGAGCCCTACCCGGGCGAATGATCGAAGACGGCTACCGCCCGACCACGAGCGGCAGCATGACCTCGGC CTCGATGGCGTTCATGCGCGATCACGGTGTCCTCAAGGACATCTATTCCGAGAGCACTGGCACGGCGCACAAGACCGCGA AAGGCACGAAAGTCAGTGTCAGAACGGTCAAGGCTCCGGGCTTCGGCCCCAAGGGCGTGTTGCGTTGCATCCTGCCGTTC ACGATCTTTCTCAAGCTCAAGGACATCGGCGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGA CACGGCGCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGGCTCACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA CGACCTTGCTGGGCGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCG CGCACGCGCAACACCTTGGCGTTCGTCCCGGCTCAGTTCTCTGAGTTCGAGCTGACGCCGAAAGAGCGCGAGCTGATCGA CGTCTGCAAAGAGGAGAAGGCGCAGGGCCGCAAGGTTCTGGCCTATACGGTCTATACCGGCACGCGCGACACCACGTCGC GCCTGAAGGTGCTGCTGGAGCAGGAAGGCTTCAAAGTGGCGGTACTGCGCGCAAGCGTGGATGCCAGCCGCCGCGAGGAC TGGATCGCCGAGCAGTTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAACTCGTCAAGACGGGATTGGACCTGTT GGAGTTTCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAACAGGCGGCACGCCGCTCCTGGCGCA TCGGGCAGAAACAGCCTGTGCGCGTGATCTACCTCGGCTACGCCGGCTCCTCGCAGATGACCTGCCTTGAGTTGATGGCC AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGATGTGCCCGAATCCGGGCTCGATGTCCTGAACCAGGATGGTGATTC CGTCGAGGTTGCACTGGCCCGGCAACTGGTAACCGCCTGA Protein sequence : MSLDLESTAAEATPVQGELLDAAPSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQAHRQLIVASLKRKLFEAQAEV VYAAAELLVDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVTGAKVWVLNGPDTLV KLIRLREQLGVQPTGQEFYVLGRVRMRMGFHWKPVFTRRRTRHGDVAACPDCGTVITDLDGEPVNPIALEAEEYRRKCSH CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQRLMQKFGDGFLASMLGDNIHEFINLMDGSGELVFSDRQATR MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF YLLFRALPGRMIEDGYRPTTSGSMTSASMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP RTRNTLAFVPAQFSEFELTPKERELIDVCKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRRED WIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 97 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 72 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 72 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 70 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 6e-167 | 50 |
