Gene Information

Name : Plav_3389 (Plav_3389)
Accession : YP_001414649.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3628450 - 3628848 bp
Length : 399 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_2302 transcriptional regulator, MerR family

DNA sequence :
ATGATGCGGATCGGTGAACTGGGCAAGAAGGCAGATTGCTTGGTGCAGACCGTGCGCTTTTACGAGTCAGAAGGCTTGCT
GCCCGAGCCTGCACGTAGCGAGGGCAACTTCAGGCTCTATGACGAAGTCCATTTGCAGCGCTTGCTGTTCATCCGCCGCT
GCCGGGCGAAGGACATGACGCTGGATGAGATCCGTCAACTGCTGAACTTACGGGATCGGCCAGAGTTGGGCTGCGGCGAG
GTGAACGCGCTGGTCGACGCTCATATCGCGCAAGTGCGGACCAAGATGAAGGAATTGCGCGCCTTGGAGCGCGAGTTAAT
GGATCTGCGACGCTCCTGCGATAGCGCCCGAACCTCGCGCGAGTGCGGCATTCTCAACAGCTTGGCCGAGCCCGCCTGA

Protein sequence :
MMRIGELGKKADCLVQTVRFYESEGLLPEPARSEGNFRLYDEVHLQRLLFIRRCRAKDMTLDEIRQLLNLRDRPELGCGE
VNALVDAHIAQVRTKMKELRALERELMDLRRSCDSARTSRECGILNSLAEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 7e-57 100
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-31 46
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 7e-31 46
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-31 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-31 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 5e-31 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 5e-31 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plav_3389 YP_001414649.1 MerR family transcriptional regulator BAC0301 Protein 5e-32 58
Plav_3389 YP_001414649.1 MerR family transcriptional regulator BAC0058 Protein 2e-36 55