Gene Information

Name : Plav_3384 (Plav_3384)
Accession : YP_001414645.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3623255 - 3623695 bp
Length : 441 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACACAATTCATCGGCGAGGGCAACATCGGATCGCCTCCCGAGTACCGCGAATTCCCCAATGGCAACGACGATCC
TCGCCGGTTGCTCCGGCTGAACGTGTACTTCGACAACCCCGTCCCCACCAAGGGCGGCGAGTTCGAGGACCGCGGCGGCT
TCTGGGCGCCGGTGGAACTCTGGCACCACGACGCCGACCGCTGGCAGCAGCTCTACCAGAAGGGCATGCGGGTGCTGGTC
GTCGGCCGCATGGAGCGCGACCCCTGGACGGACAACGAAGATCAGCCGCGTGAGACTTGGCAGGTCAACGCGCGCAGTGT
CGGCATCCTGCCGTACCGCATCGAGTCTGTGGCCCTCAGCCCGAAGCCACAGGAGGCAGAGCCGAAGCCCCAGGCCACCC
AGGAATCGACGGCGCCGAAAGAGACCAAGCGCAGGAAGTGA

Protein sequence :
MSTQFIGEGNIGSPPEYREFPNGNDDPRRLLRLNVYFDNPVPTKGGEFEDRGGFWAPVELWHHDADRWQQLYQKGMRVLV
VGRMERDPWTDNEDQPRETWQVNARSVGILPYRIESVALSPKPQEAEPKPQATQESTAPKETKRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 6e-65 100
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 4e-43 67
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 6e-25 52
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 5e-30 50
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 1e-25 49