Gene Information

Name : Plav_3376 (Plav_3376)
Accession : YP_001414637.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3616676 - 3616888 bp
Length : 213 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: har:HEAR1968 putative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage

DNA sequence :
ATGTCGCAAGTACCTGTACTGCCACCGCACGAGCGCCGCATCCTGCGGCTCGATGAAGTTGAAGCGAAGTCCGGCTTCAA
ACGCGCCCACATCTACAACCTGATGAAGAAGCGCCAGTTTCCACAGGCGTTGCGCCTTGGCGTGCGCGCGGTGGGCTGGG
ATTCGGTCGAGATCGATCAGTGGATCGCCGAACGCCTTAACAACCGCACCTGA

Protein sequence :
MSQVPVLPPHERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSVEIDQWIAERLNNRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-27 95
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 9e-19 75
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-08 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 7e-10 44
unnamed CAA21398.1 - Not tested HPI Protein 1e-09 44
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-08 42