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Name : Plav_3030 (Plav_3030) Accession : YP_001414294.1 Strain : Parvibaculum lavamentivorans DS-1 Genome accession: NC_009719 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 3230885 - 3232192 bp Length : 1308 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); seryl-tRNA synthetase class IIa; KEGG: sme:SMc02064 seryl-tRNA synthetase DNA sequence : ATGTTCGACATCAAGGCCATTCGCGACGACGCTGGGGCATTCGATGCCGGGCTTGCGAAACGCGGGCTCGCGCCGCAGGC CGCGCGCCTTATCGAGATCGACGAGCGCCGCCGCGCCATCATAACTTCCCTTCAGGAATTGCAGCAGCGCCGCAACGATG CCTCCAAGCAAATCGGCCAGGCGAAGGCGAAGAAAGACGACGCGCTGGCTCAAAGCCTGATGGAAGAGGTGGCGAGCATC AAAAGCGCCATTCAGGAGGGCGAGGAGAAGGAACGCGCCGCCAATGCCGAGATTGAAGCGGCGCTGGCCTCCATTCCCAA TATTCCCTTCGACGATGTTCCTGTCGGTCCCGATGAGAGCGCCAATGTCATCCGCCACAGCCATGGCAAGGCGCGTGAGA TGAACTTCGCGCCGAAAGAGCATTTCGATCTCGGCGAGGCCCTGGGCCTGATGGATTTCGAGGCGGCTGCGAAGATGTCC GGCGCGCGGTTCACAGTGCTCAAGGGCCAGCTCGCGCGGCTCGAACGCGCCATCGGCAATTTCATGGTGGATCTCCACAC GACCGAGTTCGGCTATGAGGAAGTCGCGCCGCCCCTGATGGTGCGCGACGACGCCATGTTCGGCACCGCACAGCTTCCGA AGTTCGAGGACGACCAGTTCGCGACATTCAAAGGTCTGGCGCGTGACGATCAGGAAAAATACTGGCTGATCCCGACAGCC GAAGTGCCGCTGACCAATCTCGTGCGCGAGAGCATCCTCTCCGAAGAGGAGCTGCCGAAACGGTTTACCGCTTACACAGC CTGTTTCCGCGCCGAGGCTGGATCCGCCGGGCGCGATACGCGCGGCATGATCCGCCAGCATCAGTTTTCCAAGGTTGAAC TCGTCTCGATCACGACGCCGGAGAAGTCACGCGAGGAACACGAGCGGATGCTCTCCTGCGCCGAAGAGGTGCTGAAGCGG CTCGATCTGCATTATCGCGTCATGACGCTGTCCACCGGCGACATGGGGTTTGCCTCGCGCAAGACCTATGACATCGAGGT CTGGCTGCCGGGGCAGAACGCCTTCCGGGAAATTTCGTCCTGTTCCGTCTGCGGCGACTTCCAGGCGCGGCGGATGAATG CGCGCTACCGGCCCAAGGGCGAGAAGAACACGCGCTTCGTGCATACGTTGAACGGATCCGGCCTTGCCGTCGGGCGCGCG CTTGTGGCGGTGATGGAGAATTACCAGCAGGCCGATGGCTCCATCACTGTTCCCACGGCGCTCCAACCCTATATGGGCGG GCAGGAGGTTATCGCCGTTCATGGCTAA Protein sequence : MFDIKAIRDDAGAFDAGLAKRGLAPQAARLIEIDERRRAIITSLQELQQRRNDASKQIGQAKAKKDDALAQSLMEEVASI KSAIQEGEEKERAANAEIEAALASIPNIPFDDVPVGPDESANVIRHSHGKAREMNFAPKEHFDLGEALGLMDFEAAAKMS GARFTVLKGQLARLERAIGNFMVDLHTTEFGYEEVAPPLMVRDDAMFGTAQLPKFEDDQFATFKGLARDDQEKYWLIPTA EVPLTNLVRESILSEEELPKRFTAYTACFRAEAGSAGRDTRGMIRQHQFSKVELVSITTPEKSREEHERMLSCAEEVLKR LDLHYRVMTLSTGDMGFASRKTYDIEVWLPGQNAFREISSCSVCGDFQARRMNARYRPKGEKNTRFVHTLNGSGLAVGRA LVAVMENYQQADGSITVPTALQPYMGGQEVIAVHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-94 | 51 |
