Gene Information

Name : Plav_2946 (Plav_2946)
Accession : YP_001414210.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : -
Position : 3143739 - 3145055 bp
Length : 1317 bp
Strand : +
Note : PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: gbe:GbCGDNIH1_1434 putative aminotransferase AatC

DNA sequence :
GTGACCAAGGCTCTCAGGATAGGCATTGCCGGCCTCGGCACTGTCGGGGCGGGCGTCGTCAAGATATTGGCCGCGCGCGG
CGACTATCTCGCGGCGGCGTGCGGGCGGCCGATCGAGCTTGTCGCGGTGTCGGCGCGCAACTCCAACAAGGATCGCGGCA
TCGACCTTTCCGGCGTGCGCTGGGAGAGCGATCCGATGGCGCTCGCGCGGGCGGACGATATCGACCTCGTGGCGGAACTG
ATCGGCGGCTCGGAAGGCGTTGCGCGCGAACTCGTGGAAGCGGCGCTCAAGGCTGGCAAGCATGTCGTCACCGCGAACAA
GGCGCTGATCGCGCATCACGGCACGGCGCTGGCGCGGCTCGCGGAAGAGAAGGGCGTTGCGCTCAATTATGAAGCGGCGG
TGGCCGGCGGCATACCGATCGTCAAGACGATGCGCGAGAGCCTGGCGGGCAACGAGATCCGCAGCATTCACGGCATTCTG
AACGGCACCTGCAACTACATCCTGACCGAGATGGAGACGACGGGGCGCGACTTCGCGGATGTGCTGAAGGATGCGCAGGA
TCTCGGCTATGCGGAGGCCGACCCGACATTCGACGTGGGCGGGATCGACGCGGCGCACAAGCTGGCGATCCTGGCGAGCC
TTGCCTTCGGCACGGAAGTCGACTTCGCCAATGTGCATATCGAGGGCATCGAGAAGATCAGCGCGACCGACATCGCCTTT
GCGCGCGAGTTCGGCTTCAAGGTGAAGCTGCTGGCGATTGCCGAGAAGGTGGATGGCGGCGTCGTGCAGCGCGTGCATCC
GGCGCTGGTGCCCGAGGGAACGCCGCTGGCGGCGGTGTCCGGCGTTTACAACGCGGTAGCGGTCGATGGCGACAGGGTGG
GGCATCTCGTGCTTGAAGGGCGCGGCGCCGGCGAGGGGCCGACGGCTTCGGCCGTGCTGTCCGATCTCGCGGATATTGCG
CGCGGGCTCATCCTGCCGCCGTTCATTCTGCCGGCAAAGAAGCTGAAGGCGCCGGCGAAGCCCGCGATGGATACGCATAA
AAGTTCGTTCTATCTGCGGTTTCTTGCCGTGGACCGCGCGGGCAGCATGGCCGCGATCACGCAGGCGCTGGCGCAGGCCT
CCGTCTCGATCGAGCGGATCGTGCAGCGCGGCGAGGCGGGGAAGAAGGCAAGCGGCGACGGCAGGCTGCCGGTGGTTTTC
ATCACGCATGAGACGGATGAAGGCACGATGGCCCGCGTGCGGGCATTACTAGCGGAACATGAAGACGTGGCGGGCACGCC
GCAGGTCGTGAGGATCGAGGACGGCGAGCTTCGCTGA

Protein sequence :
MTKALRIGIAGLGTVGAGVVKILAARGDYLAAACGRPIELVAVSARNSNKDRGIDLSGVRWESDPMALARADDIDLVAEL
IGGSEGVARELVEAALKAGKHVVTANKALIAHHGTALARLAEEKGVALNYEAAVAGGIPIVKTMRESLAGNEIRSIHGIL
NGTCNYILTEMETTGRDFADVLKDAQDLGYAEADPTFDVGGIDAAHKLAILASLAFGTEVDFANVHIEGIEKISATDIAF
AREFGFKVKLLAIAEKVDGGVVQRVHPALVPEGTPLAAVSGVYNAVAVDGDRVGHLVLEGRGAGEGPTASAVLSDLADIA
RGLILPPFILPAKKLKAPAKPAMDTHKSSFYLRFLAVDRAGSMAAITQALAQASVSIERIVQRGEAGKKASGDGRLPVVF
ITHETDEGTMARVRALLAEHEDVAGTPQVVRIEDGELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 2e-69 46
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 2e-69 46