Gene Information

Name : Plav_0264 (Plav_0264)
Accession : YP_001411544.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : -
Position : 285462 - 286292 bp
Length : 831 bp
Strand : -
Note : TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: dde:Dde_2743 glutamate racemase

DNA sequence :
ATGAGCGACAAGAGCGAACGCGCCATCGGCGTTTTCGATAGCGGCATCGGCGGCATCACCGTCCTGAAGGCCCTGCGCGC
GGCGCTGCCGCATGAAGACCTCGTCTATCTGGGCGATACGGCGCGCCTGCCCTACGGCACGAAGAGCCCCGAAACCGTGA
CGGCCTATGCAACGCAGGCGACGAAGCACCTCATGGAGCATGGGGTGAAGATGGTCGTCATCGCCTGCAATACGGCGTCC
GCCGTCGCGATCGGGCCGCTGACGGAAGCCTTGAAGCCCTTGCCCGTCATCGGCGTCATCGAGCCGGGGGCGAAAGCAGG
CGTCGCGGCGACAAAAAGCGGACGCATCGGCGTCATCGGAACCGAAGCGACCGTGCGGGGCGGCGCTTACATGCGCGCGA
TCCATGCGCTCGATCCGAAAGCGCAGGTAACGCAGGCGCCCTGCGGCCTCTTCGTAACGCTCGCAGAAGAAGGCTGGACC
TCCGGCGAGGTGGCCGAGGCGGCAGCGAAACGTTACCTCGCGCCGCTCTTCAAGGGCCGCAATGCGCCGGACACGCTGGT
TCTCGGTTGCACGCATTTTCCCGTGCTCGCGCGCATCATCAAGAAAGTGGTGGGCAAGAACGTCAAGCTCGTCGACAGCG
CGGCGACGACCGCCAAGGCCGTTGAGGCGGCGCTTGCCGAACAGGGGCTGGCGTCCCGGCGGCGCGGCAAGGGGAAGACA
CGCTTCCTCGCCACCGACAGCGCCGAACGCTTCGCCCGCGTGGGCGGCATATTCTTCGGCGAGACGATCCGCCCAAAGGA
TGTGGAACTGGTGGATATAAGGCCGAGCTGA

Protein sequence :
MSDKSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQATKHLMEHGVKMVVIACNTAS
AVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTEATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWT
SGEVAEAAAKRYLAPLFKGRNAPDTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT
RFLATDSAERFARVGGIFFGETIRPKDVELVDIRPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1468 YP_001800862.1 glutamate racemase Not tested Not named Protein 2e-38 43
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 3e-29 41
HP0549 BAD13991.1 - Not tested cag PAI Protein 2e-29 41