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Name : Plav_0245 (Plav_0245) Accession : YP_001411525.1 Strain : Parvibaculum lavamentivorans DS-1 Genome accession: NC_009719 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 264173 - 265801 bp Length : 1629 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mes:Meso_4080 ABC transporter related DNA sequence : ATGAGCGCGCCGCTGGTAGAAGTGAAAAATCTCTCTGTCGGCTTCCGCATGGACGGCCAAGAAACGATTGCCGTAAACCG CATATCGTTCGACATCAAGCATGGTGAAACCGTAGCGCTGGTCGGTGAATCCGGATCGGGGAAATCCGTTTCCGCGCTAT CGATCATGCAGCTCCTGTCCTATCCGCAAGCCTTTCATCCAAATGGCGAAATCTTCTTTGGCGGACAAAATCTCATTGGA GCCGACGAAAAGACCATGCGCCGCATCCGCGGCAACAAGATAACCATGGTTTTTCAGGAGCCTCTTACCTCCCTCAATCC ACTCCATACAATCGAACGGCAGGTTGGCGAGGTGTTGAGTGAGCACAAAGGGATGCGCGGTCCTGCCGTGCGCGCGCGCG TACTCGACCTGTTGCGGAAAGTCGGCATCCCCAATGCGGAGGAAAGACTCGACGCCTATCCGCATCAGCTGTCGGGCGGA CAACGCCAGCGCGTCATCATCGCCATGGCGCTTGCCAATGAGCCGGACCTGCTGATCGCCGACGAGCCGACAACGGCACT CGACGTTACGGTTCAGGCACAGATTCTTGAGCTGCTGAAGGATTTGAAACGCGAGATGGGGATGGCGCTACTTCTCATCA CGCACGATCTCGGCATTGTCAGGAAGATGGCAGACCGCGTCTTCGTCATGACCAAGGGTGAGATCGTGGAGCGCGGGCCG ACGGAACAGATATTCACCACACCCAAGCATCCCTACACGCAGCACCTCCTTGCCTCAGAACCGAAAGGACGCTCTCTCGG CGCGCCGAAGGACGGCCCTGTCGTCATGGAAGCCGAAAATCTGAAGGTCTGGTTTCCGATCAGACGCGGTCTGCTCCGGC GTACGGTAGGACATATAAAGGCTGTCGACGACGTCTCACTTACCCTGCGCGAGGGCCGGACGCTCGGCGTTGTTGGAGAA TCCGGATCGGGCAAGACAACTTTGGGCCTCGCACTCATGCGGTTGCTTTCAAGTGAAGGCGACATTCGCTTCAATGCAAA ATCCATTCAGGGGCTGAAATCCAAAGAGCTAAGGCCGCTTCGCCGGGATATGCAGATCGTCTTCCAAGATCCCTTTGGCT CGCTCAGTCCGCGCATGTCCGTCTCGGATATTGTGAGCGAGGGCCTCCGCATTCAGCAACCGGGGCTCGCGGCAGCCGAG CTGCGAATGCATGTGTCTGAAGCTCTTGGCGAAGTTGGCCTCGACCCGGAAATGCAGGACCGGTATCCGCACGAATTTTC CGGTGGCCAGCGACAGCGCATTGCCATTGCGCGCGCGATGGCACTAAAGCCGCGTTTTGTAATGCTCGACGAGCCTACCA GTGCCCTGGACATGTCCGTGCAGGCCCAAATCGTCGACCTTCTGCGCGATCTGCAGAGGCGGTATAATCTCGCCTATCTC TTCATCAGCCACGATTTGAAGGTGGTGAGAGCGCTTGCGGACGACATCATCGTCATGCGGGGGGGCAAAGTTGTAGAGAC GGGGACGGCCGATCAGGTTTTCGATGCGCCGAAAACCGAATACACCAAGGCGTTGATGGCGGCGGCATTCGATCTTGCCG TCACGCCGGCAGGGGCCGTTTCCGAGTAG Protein sequence : MSAPLVEVKNLSVGFRMDGQETIAVNRISFDIKHGETVALVGESGSGKSVSALSIMQLLSYPQAFHPNGEIFFGGQNLIG ADEKTMRRIRGNKITMVFQEPLTSLNPLHTIERQVGEVLSEHKGMRGPAVRARVLDLLRKVGIPNAEERLDAYPHQLSGG QRQRVIIAMALANEPDLLIADEPTTALDVTVQAQILELLKDLKREMGMALLLITHDLGIVRKMADRVFVMTKGEIVERGP TEQIFTTPKHPYTQHLLASEPKGRSLGAPKDGPVVMEAENLKVWFPIRRGLLRRTVGHIKAVDDVSLTLREGRTLGVVGE SGSGKTTLGLALMRLLSSEGDIRFNAKSIQGLKSKELRPLRRDMQIVFQDPFGSLSPRMSVSDIVSEGLRIQQPGLAAAE LRMHVSEALGEVGLDPEMQDRYPHEFSGGQRQRIAIARAMALKPRFVMLDEPTSALDMSVQAQIVDLLRDLQRRYNLAYL FISHDLKVVRALADDIIVMRGGKVVETGTADQVFDAPKTEYTKALMAAAFDLAVTPAGAVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-79 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-79 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-79 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-79 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-91 | 43 |
