Gene Information

Name : Plav_1752 (Plav_1752)
Accession : YP_001413028.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1897118 - 1897882 bp
Length : 765 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_1994 glucose 1-dehydrogenase

DNA sequence :
ATGGGTTTGCTCGACGGGAAAATCGCCATTGTCACGGGCGCGAGCTCCGGTATCGGCCGCGCGGCGGCGCTGCTCTTCGC
GCAGGAAGGGGCAAGCCTCGTCGTCACAGCGCGACGCAAGGCGGAGCTTGATGCGCTTGTTGCCGAAATAACAGCGCAAG
GCGGCGAAGCGGTCGCTCTTGCGGGCGATATATGCGACGAAACGCTTGCTGTGCGCCTTGTCGCGCTTGCGACGGACCGT
TTTGGAGGTCTCGACATTGCCTTCAACAATGCCGCCACCACGGGTAGCCTTCTTTCCACGGTCGAGATTCCTCTTGCGGA
CTGGCGGCTCACCCTCGACACCAATCTCACTGCCGCCTTCATGGGCGCGCAGGCGCAACTCCCCGCCATGCTCGCGCGCG
GCGGCGGTTCGCTCATCTTCACCTCCACCATTGTCGGTCACGAGCTCGGCCTTCCCGGCATGGCGGCCTATGCGTCGAGC
AAGGCAGGGCTCGTCGGTCTCGCACGTGTCATAGCCGCCGAATATGGTGCGAAGGGCATCCGCGCCAATGCGCTCCTCCC
CGGTGGCACGGACACGCCGATGGGCCGCGATGCCGCGCCAACGCCGGAGGCGCTGTCCTTTGTCGTCGGGTTGCACGCTC
TGAAGCGCATTGCCCAGCCAGAAGAAATTGCCCGTGCCGCCCTCTTCCTTGCCTCGGATGCCTCCAGCTTCGTGACCGGC
AGCGCCCTCCTCGCCGATGGCGGTGTCTCGATCAACAGAGCGTAA

Protein sequence :
MGLLDGKIAIVTGASSGIGRAAALLFAQEGASLVVTARRKAELDALVAEITAQGGEAVALAGDICDETLAVRLVALATDR
FGGLDIAFNNAATTGSLLSTVEIPLADWRLTLDTNLTAAFMGAQAQLPAMLARGGGSLIFTSTIVGHELGLPGMAAYASS
KAGLVGLARVIAAEYGAKGIRANALLPGGTDTPMGRDAAPTPEALSFVVGLHALKRIAQPEEIARAALFLASDASSFVTG
SALLADGGVSINRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-17 44