Gene Information

Name : Plav_1393 (Plav_1393)
Accession : YP_001412670.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1522833 - 1523525 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3651 ABC transporter component

DNA sequence : 
TTGCCTCAAAACATAATCGAACTTGCCAGCGTCAAGCTCACCCTGCCGAGCGCGGCCGGGCCGGTCAACATCCTCCGCGG
CATCGACCTCGCCATCGGCGCGGGCGAAGCCGCCGGTCTCGTCGGGCCGTCCGGCTCCGGCAAATCCACCCTTCTCATGG
TGCTTGCGGGGCTCGAGCGTCCAAGCGAGGGCCGCATCGTCGCGGCAGGGGAAGATCTCACAGGCCTTGGCGAGGATGCG
CTGGCGCGCTTCCGCCGCAATCATATAGGCATCGTCTTCCAGTCCTTCCACCTCATCCCCACCATGACGGCGCTCGAGAA
TGTCGCGATCCCGCTTGAGTTCGCGGGCCGGCAGGATGCTTTCGCGCGCGCGGAGGAAGAGCTTCGCCTTGTCGGCCTCG
GCCACAGGCTCACACATTATCCGGGTCAATTGTCGGGCGGCGAACAGCAGCGCGTGGCGCTGGCGCGCGCGGTCGCGGGC
GATCCGGAAATCCTTCTGGCGGACGAGCCGACCGGCAATCTCGATCAGGCGACGGGACACGAGATCATCGAACTCATGTT
CGATCTTCATACGCGCAAGGGAACGACGCTCGTCCTCATCACCCATGACGAAGAACTCGCCGCCCGCTGCGACCGCGTCA
TCCGCCTGCGCGACGGACTGGTCGAAAGCATTGAAGCGGGAGCGGCGGCGTGA

Protein sequence : 
MPQNIIELASVKLTLPSAAGPVNILRGIDLAIGAGEAAGLVGPSGSGKSTLLMVLAGLERPSEGRIVAAGEDLTGLGEDA
LARFRRNHIGIVFQSFHLIPTMTALENVAIPLEFAGRQDAFARAEEELRLVGLGHRLTHYPGQLSGGEQQRVALARAVAG
DPEILLADEPTGNLDQATGHEIIELMFDLHTRKGTTLVLITHDEELAARCDRVIRLRDGLVESIEAGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plav_1393 YP_001412670.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-36 48
Plav_1393 YP_001412670.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-40 43
Plav_1393 YP_001412670.1 ABC transporter-like protein NC_012469.1.7685735. Protein 3e-36 43