Gene Information

Name : Plav_1349 (Plav_1349)
Accession : YP_001412626.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1480192 - 1481118 bp
Length : 927 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: pde:Pden_3630 porphobilinogen deaminase

DNA sequence : 
ATGCAACGGCGCTACCGCATCGGCACAAGAGGCTCCAGATTGGCGCTCATCCAGGCGAACGAAGTCGCCCGCCGGATTGC
GCTTGCTCTTCACGCTCCTGTGGAGGAAGTGACGGAGATCGTCGTGATTTCGACGGCGGGCGATCGGGTCCAGGACCGGG
CGCTCTCGGAGATCGGCGGCAAGGGCCTCTTTACGGAGGAGATCGAGGAGCAGCTCGCGGATGCAAGGATCGATGTCGCG
GTCCATTCGATGAAGGACATGCCGACGCTGTTGCCGGAAGGTTTGGTGATCGATTGCCTGCTGGAACGGGCCGATCCGCG
CGATGCATTCCTGTCGTCCAAGGCCAACTCGCTGATGAGCCTTCCGCAAGGGGCGGTCGTCGGCACCTCTTCGCTCCGGC
GCGCGGCCCAGGTGCGTGCGCGGCGGCCGGATGTCACCGTGGTTCCTTTTCGCGGCAATGTGGATACGCGGCTGAAGAAG
CTTGCCGACGGCGTTGCCGATGCGACGCTTCTTGCCATGGCCGGCCTCACACGCATGGACCTGCTTGAATGCGTCACGGC
GCCCCTCTCGCCGGAAGAGCTGCTCCCCGCCGTTGCCCAGGGCGCTATCGGCATTGAGCGCCGCGCCGCCGACGACGAGG
CGGCCCACCTGCTTGAAAAGCTGCACCACACAGAGACCGGGCTTCGCGTCGCGGCGGAGCGTGCTTTCCTCGCTGTGCTC
GATGGTTCCTGCCGCACGCCGATTGCCGCCCTTGCCGAGATCTCCGGCGATCATATGCGTCTGCGCACCATGATCCTGAC
GCCGGATGGTGCCGAAATCCATGAGACCGAGCGAGAAGGCCTGGCCGCGGACGCGGTTTTGCTCGGCCAGGATGCGGGTG
AGGAGCTCAAGGGCAGGGCGGGCCCCCATTTCTTCGACACGGTCTGA

Protein sequence : 
MQRRYRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIGGKGLFTEEIEEQLADARIDVA
VHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLMSLPQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKK
LADGVADATLLAMAGLTRMDLLECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAVL
DGSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGRAGPHFFDTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-44 44
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-44 44