Gene Information

Name : Plav_1308 (Plav_1308)
Accession : YP_001412585.1
Strain : Parvibaculum lavamentivorans DS-1
Genome accession: NC_009719
Putative virulence/resistance : Unknown
Product : UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0654
EC number : -
Position : 1445583 - 1446812 bp
Length : 1230 bp
Strand : +
Note : TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: rde:RD1_0036 2-octaprenyl-6-methoxyphenol hydroxylase

DNA sequence :
ATGAGCAATGCACCGGATAGCGATGTGCTGATTGTCGGCGGGGGCCTTTCCGGCCTGCCGCTTGCCCTCGCCTGCGCGCA
GGGCGGGCTTTCGGTCACGGTCATCGATGCGCTCGATCCCGCGACCGTCACGGATGCGGCATTCGACGGCCGCGTCTCGG
CCATCGCGCTTGCCTCCTGCCGGATGCTGGACAGCCTCGGTGTCACCGCTCATCTCGAGGGTCAGATGCAGCCGATCAAC
GACATCATGGTGTCGGATGGGCGGGTGCGCGAAGGTGCCTCGCCGCTCTTCCTCCATTTCGATCACAAGGAAATCGGCGC
CGAGCCGCTCGGCAATCTGATCGAGAACCGGCATGTCCGGATCGCGATGCAGAAAGCGGTCGAAGCGGAGCCGCTCATTC
GCCTCATCGCGCCGCGCTTCGTGAAACATGTCGAATATGGCGCGCGCGTCACCGCCACGCTCGACAATGGCGAAGAGGTA
ACCGCGCGTCTCTGCTTCGCCGCCGATGGCCGCAACTCGCCGACGCGCGAAGCGGCGGGCATCAGGACGGTCGGCTGGGA
TTACGGCCAGACCGGCATTGTCTGCACCGTCGAGCATGAATTGCCGCATGAGGGTGTGGCGCAGGAATATTTCCTGCCCG
GCGGCCCTTTCGCGATCCTGCCCATGGTCGGCAACCGTTCCTCGCTTGTCTGGACGGAGAAGACGGCGGATGCGAAAGCG
ATCCTCGCCCTTGGCGATGAAGCCTTCGCGGATGAGATGCGTGCCCGCTTCGGCGACTATCTCGGCGCTTGCGCGCCCAC
GGGTCCGCGCTGGTCCTATCCGCTGACGCTGCAGCTCGCGCGCGATTATGTGCGCCCGCGCCTCGCGCTTATCGGCGATG
CGGCGCATGGCATTCATCCGATTGCGGGGCAGGGGCTCAATCTCGGGCTTCGCGATGTTGCGGCGGCGGCGGAAGTCGTG
GTCGATGCGGCGCGGCTCGGCCTCGATATCGGCGCCCTCGACGTGCTGGAGCGTTACCAGCGCTGGCGCCGTTTCGACAA
TGTGGCGCTCTCCCTGCTGATGGACGGGCTCAACCGCCTCTTCTCGAACGATATCGGCCCGGTCCGCCTTGCGCGGGATC
TGGGACTCGGCATCGTCCAGCAGATCGGCCCCGCCCGGCGCTTCTTCATGCGCCATGCCGGCGGCGTCGTCGGCGATCTG
CCGCGCCTCCTGAAGGACGAGACGGTTTAG

Protein sequence :
MSNAPDSDVLIVGGGLSGLPLALACAQGGLSVTVIDALDPATVTDAAFDGRVSAIALASCRMLDSLGVTAHLEGQMQPIN
DIMVSDGRVREGASPLFLHFDHKEIGAEPLGNLIENRHVRIAMQKAVEAEPLIRLIAPRFVKHVEYGARVTATLDNGEEV
TARLCFAADGRNSPTREAAGIRTVGWDYGQTGIVCTVEHELPHEGVAQEYFLPGGPFAILPMVGNRSSLVWTEKTADAKA
ILALGDEAFADEMRARFGDYLGACAPTGPRWSYPLTLQLARDYVRPRLALIGDAAHGIHPIAGQGLNLGLRDVAAAAEVV
VDAARLGLDIGALDVLERYQRWRRFDNVALSLLMDGLNRLFSNDIGPVRLARDLGLGIVQQIGPARRFFMRHAGGVVGDL
PRLLKDETV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ubiH CAD42832.1 putative 2-octaprenyl-6-methoxyphenol 4-monoxygenase Not tested trw-PAI Protein 2e-64 42