Gene Information

Name : Fnod_0674 (Fnod_0674)
Accession : YP_001410186.1
Strain : Fervidobacterium nodosum Rt17-B1
Genome accession: NC_009718
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 736096 - 736506 bp
Length : 411 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tma:TM0604 single stranded DNA-binding protein, putative

DNA sequence :
ATGTCTTACAACAAAGTAGTTTTAGTTGGAAGGCTAACAAGAGATCCAGAAACAAAACAGACTCTAGATGGAAATTTGAT
AACGACTTTCACTTTAGCAGTTAATAGGGCAAACAATGGAGAAGCAGATTTTATACGCATAGTTGCGTTTAGAAAGTTAG
CTGAGTTAGCTCATACTTACCTTCAAAAGGGGCGAATGGTTCTTGTAGAAGGTAAGTTGAGGATAAACAAATGGAAAACA
AACGATGGGCAATCGCGTTCAACTCCTGAGATATGGGCTGATAATATTGTCTTTGTTGATACAAAGAAAGGCGATAGAGA
TGTCCAAGACGAGATTCCTTACGAAGATGTCTTTGATACAGACGCAGAAATAGTAGACAACATTCCAGACGACGATGAAC
CACCGTTTTGA

Protein sequence :
MSYNKVVLVGRLTRDPETKQTLDGNLITTFTLAVNRANNGEADFIRIVAFRKLAELAHTYLQKGRMVLVEGKLRINKWKT
NDGQSRSTPEIWADNIVFVDTKKGDRDVQDEIPYEDVFDTDAEIVDNIPDDDEPPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-14 45
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-15 45
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-15 44
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-14 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-15 44