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Name : rplS (Fnod_0651) Accession : YP_001410163.1 Strain : Fervidobacterium nodosum Rt17-B1 Genome accession: NC_009718 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 714146 - 714493 bp Length : 348 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAGCATGGACAACATTGTTAGAATCATTGAGAAATCTCAGTTAAAAGAAGTTCCAGAGTTTAGACCTGGCGACACAGT TAGAGTACACGTTAAAGTTAAAGAAGGAGATAAGGAAAGAATACAGGCATACGAAGGTGTAGTTATTTCCATAAGAGGTT CTGGCATTAGCAAAACATTCACAGTAAGAAGAATTTCTGCAGGTGGAATCGGTGTTGAGAGAATCTTCCCACTTTACGCG CCAACTATCGATAAAATTGAAGTTGTAAGAAGAGGTAGAGTAAGGAGGGCAAAACTCTACTACTTGAGGGATGTCAAGGG TAAGGTGAAAATTAAGGAGAGAAAATAA Protein sequence : MSMDNIVRIIEKSQLKEVPEFRPGDTVRVHVKVKEGDKERIQAYEGVVISIRGSGISKTFTVRRISAGGIGVERIFPLYA PTIDKIEVVRRGRVRRAKLYYLRDVKGKVKIKERK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 6e-30 | 64 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-25 | 59 |
