Gene Information

Name : Xaut_5086 (Xaut_5086)
Accession : YP_001409520.1
Strain :
Genome accession: NC_009717
Putative virulence/resistance : Virulence
Product : type IV secretion/conjugal transfer ATPase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 306952 - 309324 bp
Length : 2373 bp
Strand : -
Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: sme:SMa1315 VirB4 type IV secretion protein

DNA sequence :
TTGGCCTTGCCTAACGTCGTCATTCTCAAAACCCGCGAGCTCGAGCCCGAGACCTTCATCCCGTATGTCCGTCACGTGGA
CGAGACGACGATCGCGCTCGATTCCCGGGCGCTGATGGTCATGATTGCCCTCGACGGCATATCGTTCGAGACGGCCGATC
CGCTCGAACTCAACGGCCTTCATCGCGACCTCAACACGCTCTACCGCAACCTCGCGGACGAACGCCTCGCGCTTTGGACC
CACATCCTCCGTCGTCGCGACAACGACTATCCCGAGGGAGCGTTTGCCAATCCCTTCTCCGCTGCCCTGAACGCGAAATA
TCGCGCCCGCATGGTAGAGGAGGATCTCTTCCGCAACGACCTCTATCTGACCCTGCTGTGGTATCCGACCCGCGATCCCG
CTGAGAAGATCTCGAAGCTCCTGGGCCGCCTTCGCCGGGCGCGCCGCGGGAGCGTAGAGCTCGACGAGGAGGCGCTCAAG
CAGTTGCGCGACAAGGTCACCGACGTGACGGCCGGCCTCAAGCGGTTCCAGCCACGTGTTCTTTCCCTCTACGAACACGA
TGGTCTTCTGTTTTCCGAGCCGAGTGAGGTCCTGCACCAGATCATCGGCGGCCGGCGGGAACGAGTGCCCCTCACGGAGG
GGCGGGTTTCGTCAGCGATCTATTCCGACCGCGTCATCATCGGTCGCGAGACGGTGGAGATCCGCCATGAGGCTGAGACC
CGGTATGCAGGGATCTTCAGCTTCAAGGAATATCCCGCCCGGACCAGGCCCGGCATGCTCGCTGGCGTCCTCACCACGCC
GTTCGAGCTCATCCTGACGCAGTCCTTCGCGTTCGCCTCAAAGGCCGATGCCCGGACCATCCTGGGACGCAAGCAGAACC
AGATGGTGAGCGCCGGCGACAAGGCGAATTCGCAGGTCGATGAGCTCGATGGCGCCCTGGACGAACTGGAATCCAATCGC
TTCGTGCTGGGCGAGCATCACCTGACGCTGTCGGTCTTCGCCCCATCGGTGAAGGACCTCACCGACAATCTGGCGAAGGC
ACGCTCTCATCTGACCAACGGCGGTGCCGTCGTGGCACGCGAGGACCTTGGCCTCGAAGCCGCCTGGTGGGCGCAGCTGC
CTGGCAATTTCCGCTACCGGGCCCGCTCTGGTGCGATCACCTCGCGCAACTTTGCCGCGCTGTCGCCATTTCACTCCTAT
CCGGTCGGCCGGAAGGACGGCAATGAATGGGGGCCGGCCGTCGCGATGCTCAAGACGGCCTCCGGCTCGCCGTTCTATTT
CAACTTCCACCATGGCGATCTCGGCAACACCTTCGTGTGCGGCCCCTCTGGATCCGGCAAGACCGTTATCCTGAACTTCA
TGCTCTCGCAGCTCGAGAAGCACGATCCCCACATGGTGTTCTTCGACAAGGACCGTGGCGCCGATCTCTTCGTGCGGGCG
GCGGGCGGCACGTATCTGCCTCTGAAGAATGGGACGCCAACCGGCTGCGCGCCGCTGAAGGGGCTTGAGCTCACACCGGA
GAACAAGGTGTTCCTGGCGCAATGGATCGCCAAGCTCGTCGGCTCAAAGTCGCGCGAGCTTTCCGTGAGTGACCTGCGCG
ACATCGCCGGCGCCGTCGACGGCCTCGCGGACCTCCCGGTCCAGCGGCGCACCATCGGCGCGTTGCGCACCTTCCTCAAC
AACACCGACCCGGAGGGCATTGCCGCCCGGCTGCGGCGTTGGGAGAGGGGAGGGCCCCTCGGCTGGGTCTTCGACAACGA
GACCGACGACATTGGCATCGGCGCCAAGTTCCTCGGCTACGACATGACGGATTTCCTCGACAATGAGGAGATCCGCACGC
CGCTCATGGCCTACCTGTTCCACCGGGTGGAGCAGCTGATCGACGGCCGCCGCATCATCATCGTTATCGACGAGTTCTGG
AAGGCGCTGCTGGACGAGGGATTTCGCGACCTCGCCCAGAACAAGCTCAAGACCATCCGGAAGCAGGGCGGCCTCATGCT
CTTCGCGACGCAGAGCCCACGCGATGCGATCGCCTCGCCGATCGCCCACACCATCATCGAGCAGTGCCCGACCCAGATCT
TCATGCCGAACCCGCGTGGCAGCCACGCCGATTACGTGGACGGCTTCAAGCTCACCGAGCGGGAATATCAGCTCATCGCG
CGCGAGCTGTCCCCTGAAAGCCGCCGCTTCATTGTCAAGCAGGGGCACAACAGCGTCGTCGCCGAGCTGAACCTCGCTGG
CTTCGACGACGAGCTCGCCGTCCTCTCCGGCCGCACCGCCAATGTCGAGCTGGCCGACGCGATCCGTGCGGAGGTCGGCA
GCGGTCAGGAGGACTGGCTCCCCCTATTCCAACAAAGAAGGAGTCCCGGCTGA

Protein sequence :
MALPNVVILKTRELEPETFIPYVRHVDETTIALDSRALMVMIALDGISFETADPLELNGLHRDLNTLYRNLADERLALWT
HILRRRDNDYPEGAFANPFSAALNAKYRARMVEEDLFRNDLYLTLLWYPTRDPAEKISKLLGRLRRARRGSVELDEEALK
QLRDKVTDVTAGLKRFQPRVLSLYEHDGLLFSEPSEVLHQIIGGRRERVPLTEGRVSSAIYSDRVIIGRETVEIRHEAET
RYAGIFSFKEYPARTRPGMLAGVLTTPFELILTQSFAFASKADARTILGRKQNQMVSAGDKANSQVDELDGALDELESNR
FVLGEHHLTLSVFAPSVKDLTDNLAKARSHLTNGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSPFHSY
PVGRKDGNEWGPAVAMLKTASGSPFYFNFHHGDLGNTFVCGPSGSGKTVILNFMLSQLEKHDPHMVFFDKDRGADLFVRA
AGGTYLPLKNGTPTGCAPLKGLELTPENKVFLAQWIAKLVGSKSRELSVSDLRDIAGAVDGLADLPVQRRTIGALRTFLN
NTDPEGIAARLRRWERGGPLGWVFDNETDDIGIGAKFLGYDMTDFLDNEEIRTPLMAYLFHRVEQLIDGRRIIIVIDEFW
KALLDEGFRDLAQNKLKTIRKQGGLMLFATQSPRDAIASPIAHTIIEQCPTQIFMPNPRGSHADYVDGFKLTEREYQLIA
RELSPESRRFIVKQGHNSVVAELNLAGFDDELAVLSGRTANVELADAIRAEVGSGQEDWLPLFQQRRSPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_5086 YP_001409520.1 type IV secretion/conjugal transfer ATPase VFG2233 Protein 0.0 63