Gene Information

Name : Xaut_5079 (Xaut_5079)
Accession : YP_001409513.1
Strain :
Genome accession: NC_009717
Putative virulence/resistance : Virulence
Product : conjugation TrbI family protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 302070 - 303230 bp
Length : 1161 bp
Strand : -
Note : PFAM: conjugation TrbI family protein; KEGG: ret:RHE_PD00152 transport secretion system IV, VirB10 protein

DNA sequence :
ATGGCGGACGATATCGAAAGCGGCGTGCCGGGAGAGCGTGGTCAGTCCGTCACTGGACGGCGGCAAGACAACCCGCTCCT
GAAACGCGGAGCGGTGGTGCTGGCCGTCATCGCATTCGTCGGCTTTGCCCTGTGGTCGATGCGAGATCGAGGACCGCGGA
CGGACGCTGAGAAGCCCGAGCGTGTCGTCATCCGGCAGACCTCGGCTTTTGAGCCGGCCCGCCAGCCTGCGGCCATGCCG
GAGGTGAAGCTGCCGACGCCGGTCGTCACGCCGCAAGCCGCCCCGGCGGACGACCCGTTGCTCGACGCCGCCCGCCGCGC
TCCGGTGATGGCGTACGGGGCACAGCGCGGCCCACAGAACCGGCAACAAGCTGCCGGCGCTCCGCCTGACGTCAACTCCA
ACTATGTACCCCTGAATGGCGCTGGAGGCGGCTTCAACGGGCCGGGCGAGAATGAGGACCGGCGTTTCGGCCGCATGATG
ACGCCGACCCGCCTCGAAGGGTCACGGGCGGGCACCCTGGGCAATCGTGATTTCATCATCGCCATGGGCACGTCGATCCC
GTGCGTCCTTGAGACCGCCTTGTCCTCGGATCAGCCCGGCTTCGCCAGCTGCGTCATCAATCGCGACGTGCTCTCGGACA
ATGGCCGTGTCGTCATGTTGGAGAAGGGCACGCAGGTCGTGGGCGAGTACCGTGGTGGCCTGCGCCGCGGGCAGGCCCGC
CTCTTCGTACTGTGGAATCGGGCCAAGACACCGAAAGGCGTGATCATCACCCTCGCATCACCGGCCACCGACGCCTTGGG
CCGGGCCGGCATGGACGGCTATGTCGACACTCATTGGTGGGAGCGCTTCGGCAGCGCTCTGCTGCTTTCGATTGTTGGCG
ACGCCGCCAACTACGCCCAGGGCCAGCTCCAGCAGGGCGACATCCAAGTCCAGAACAGCGCCAATGCCGGCCAGCAGGCG
GCCGCCATCGCGGTCGAGCAGTCCATCAACATCCCGCCGACGCTGGAGAAACACCAGGGCGAGTTGGTGTCGATCTTCGT
CGCCCGGGACCTGGATTTCTCTGGCGTCTACGGTCTGCGCGTCACCGAGCCGCGCAACACGATCTACGATCGCGGCGTGC
TCGGCGACTTCAGCCGGCGTTCGACGCTCGTCACAAAATAG

Protein sequence :
MADDIESGVPGERGQSVTGRRQDNPLLKRGAVVLAVIAFVGFALWSMRDRGPRTDAEKPERVVIRQTSAFEPARQPAAMP
EVKLPTPVVTPQAAPADDPLLDAARRAPVMAYGAQRGPQNRQQAAGAPPDVNSNYVPLNGAGGGFNGPGENEDRRFGRMM
TPTRLEGSRAGTLGNRDFIIAMGTSIPCVLETALSSDQPGFASCVINRDVLSDNGRVVMLEKGTQVVGEYRGGLRRGQAR
LFVLWNRAKTPKGVIITLASPATDALGRAGMDGYVDTHWWERFGSALLLSIVGDAANYAQGQLQQGDIQVQNSANAGQQA
AAIAVEQSINIPPTLEKHQGELVSIFVARDLDFSGVYGLRVTEPRNTIYDRGVLGDFSRRSTLVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 5e-64 44
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 1e-67 43