Gene Information

Name : Xaut_4817 (Xaut_4817)
Accession : YP_001409266.1
Strain :
Genome accession: NC_009717
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 26439 - 28040 bp
Length : 1602 bp
Strand : +
Note : PFAM: transposase IS66; KEGG: ret:RHE_PA00101 insertion sequence transposase, IS66 family

DNA sequence :
ATGATCCTCGCCGAGCGGGCTGCGCGGCTGGCCGCGGAGGCGGATGCCGCGGCCGCCAAGGCCGAAGCCGCCTCCGCCAA
GGCGGCAGCATCCTCGATCGAAGCGGAGATCGCCCATCTCCGGCTCACCATCGAGAAGCTGCGGCGCGAGCTTTTCGGGC
GGAGCTCGGAGCGCAAGGCGCGGCTCCTCGAGCAGATGGAACTCCGGCTCGAGGACCTCGAGGCAACCGCCACTGAAGAC
GAGCTGGCGGCCGAGAAGGTCGGCGGCGATGCTGCGGTTCCCACCACCCATCGGCGGCGTCCTGCCCGCAAGCCGTTCCC
CGCGCACCTGCCGCGCGAGCGCATCCTGCTTCCCGCGCCGGAGGCCTGCCCCTGCTGTGGCTCGACGAAGCTCTCCAAGC
TGGGGGAAGACATCACCGAGACGCTGGAGGTGATTCCGCGCCGCTGGAAGGTGGTCCAGACCGTCCGCGAGCGTTTCTCC
TGCCGGGCCTGCGAGGCAATCACCCAGCCGCCGGCGCCCTTCCATCCGACCCCGCGCGGCTTCGCCGGCCCCAACTTGCT
CGCCATGGTGCTGTTCGAGAAGTTCGGGCAGCATCAGCCCCTGAACCGCCAGAGCGAGCGCTATGGGCGGGAGGGCATCG
ACCTCAGCGTCTCGACCCTCGCCGACCAGGTGGGGATCTGCACGACGGTTCTTGCTCCACTCCATGACCTGATCGCCCAG
CATGTGCTGGCTGCCGCCCGCATCCATGCGGACGAGACGACCGTGCCGATCCTCGCCAAGGGCGGCACGGTCACCGGGCA
CGTCTGGGCCTACGTGCGTGACGATCGGCCCTTCGCCGGACCGGAGCCGCCAGCGGCTCTCTTCTTCGCCACCCGTAACC
GACGGCATGAGCATGCCGCGCGCCATCTCGCCGCTTTCTCTGGAATCGTTCAGTCGGATGCCTATGGCGCCTATGATGCG
CTCGGAGATCCGACACGCGCGGCCGGTGCCGTCACGTCTGGACTGTGTTGGGCCCACGCGCGCCACCAGTTCTTCGAGCT
CGCCGACATCGCCGCCAGGGTTCGACGAGGCCGGTCGGCGCCCCCGATCTCGCCGATCGCCCGGGAGGCCGTGGAGCGGA
TCGACCGGCTATTCGCGATTGAGCGAGGGATCAACGGTTGCCCGCCTGACGAGCGTCTCGCCGTCCGCAGCGAGAAGAGC
GTGGCGATTGTCGCCGACCTTCACGCGTGGCTGACCGAGGAACGGGCACGGCTGTCGCGCTCGGCAAGCGTGGCCAAGCC
GATCGACTATCTTCTGCGCCGCTTCGACCGCTTCACCACCTTCCTGGACGACGGCCGCATCTGCTTGAGCAATAATGCTG
CGGAACGCGCCCTGCGCGGCTTTGCCCTCGGACGCAAGTCGTGGCTCTTCGCCGGGTCGGAGGGCGGCGCCGAACGGGCA
GCCGCCATGGCGACGCTCATCGTCACCGCCAAGATGAACGACGTGGACCCGCAGGCCTGGCTCGCCCACGTGCTCGGCAC
CATCGCCGACATCCCACAATCCCGTCTTGCCGACCTCCTGCCGTGGAGATGGCCCGACAAGACGGCCGGCCGCGCCGACT
GA

Protein sequence :
MILAERAARLAAEADAAAAKAEAASAKAAASSIEAEIAHLRLTIEKLRRELFGRSSERKARLLEQMELRLEDLEATATED
ELAAEKVGGDAAVPTTHRRRPARKPFPAHLPRERILLPAPEACPCCGSTKLSKLGEDITETLEVIPRRWKVVQTVRERFS
CRACEAITQPPAPFHPTPRGFAGPNLLAMVLFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGICTTVLAPLHDLIAQ
HVLAAARIHADETTVPILAKGGTVTGHVWAYVRDDRPFAGPEPPAALFFATRNRRHEHAARHLAAFSGIVQSDAYGAYDA
LGDPTRAAGAVTSGLCWAHARHQFFELADIAARVRRGRSAPPISPIAREAVERIDRLFAIERGINGCPPDERLAVRSEKS
VAIVADLHAWLTEERARLSRSASVAKPIDYLLRRFDRFTTFLDDGRICLSNNAAERALRGFALGRKSWLFAGSEGGAERA
AAMATLIVTAKMNDVDPQAWLAHVLGTIADIPQSRLADLLPWRWPDKTAGRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 8e-74 45
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-77 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-76 44
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-59 43
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 9e-77 43
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-76 43
unnamed AAC31494.1 L0015 Not tested LEE Protein 8e-77 43
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-76 43
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-76 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-77 43
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-76 43
tnp AEA34686.1 transposase Not tested Not named Protein 2e-76 43
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-76 43
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-69 43
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 5e-59 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-66 41
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 8e-72 41
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 8e-72 41
unnamed AAL08460.1 unknown Not tested SRL Protein 3e-56 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_4817 YP_001409266.1 transposase IS66 VFG1700 Protein 2e-59 43
Xaut_4817 YP_001409266.1 transposase IS66 VFG0793 Protein 5e-77 43
Xaut_4817 YP_001409266.1 transposase IS66 VFG1513 Protein 3e-59 41
Xaut_4817 YP_001409266.1 transposase IS66 VFG1051 Protein 2e-56 41