Gene Information

Name : Xaut_4961 (Xaut_4961)
Accession : YP_001409397.1
Strain :
Genome accession: NC_009717
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 179455 - 180117 bp
Length : 663 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rle:RL2277 two-component response regulator transcriptional regulatory protein

DNA sequence : 
TTGCTGATCGAAGACGATCCCGTCCTGGGCGTGGCCGTGCGCGACCAGATCGTCGCGGACGGGCACGGCACCGACTGGGT
GACACGCCTCGCCGATGCCGCCGACGCCGTCCATGCCGCGGCCTTCGACCTGATCCTCCTCGACCTGATGCTCCCCGACG
GGCGCGGCTCCGATTTCCTCAGGACCCTGCGCAGCGCGGGCGCAGCGACGCCGGTCATGGTGCTCACGGCGCGCGACCAG
ATTTCCGACCGCATCGCCGCCCTCGATGCCGGCGCCGACGACTATCTGGTGAAGCCCTTCGACCTGTGCGAGCTGTCGGC
GCGCATCCGCGCGGTGGGCCGGCGCTATGCGGGCAATCCCAACCCGCTGGTCACGCTCGGCAATATCGAGGTGGACCTCG
CCGCCCGCTCGGTGCGGCGCGCCGGGCAGGCGGTCGCCCTCACGGCGCGGGAATGGGCGCTGTTCGAGGCCTTCGTCCAG
CGGCCGCACCAGCTCATGTCCAAGCCGCAACTGGAGGAGCGGCTTTATTCCTTCGATGCGGAGGTGGAGAGCAACGCCAT
CGAGGTCTATGTGGCCCGTCTGCGCAAGAAGCTCGGCGCCGACGTGATCGAGACCGTACGCGGCATGGGCTATCGCCTCG
GCACACCCGGAGGCGGTGCATGA

Protein sequence : 
MLIEDDPVLGVAVRDQIVADGHGTDWVTRLADAADAVHAAAFDLILLDLMLPDGRGSDFLRTLRSAGAATPVMVLTARDQ
ISDRIAALDAGADDYLVKPFDLCELSARIRAVGRRYAGNPNPLVTLGNIEVDLAARSVRRAGQAVALTAREWALFEAFVQ
RPHQLMSKPQLEERLYSFDAEVESNAIEVYVARLRKKLGADVIETVRGMGYRLGTPGGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_4961 YP_001409397.1 two component transcriptional regulator CP000647.1.gene1136. Protein 4e-23 43
Xaut_4961 YP_001409397.1 two component transcriptional regulator BAC0530 Protein 4e-23 43
Xaut_4961 YP_001409397.1 two component transcriptional regulator CP001918.1.gene2526. Protein 1e-22 42
Xaut_4961 YP_001409397.1 two component transcriptional regulator CP001485.1.gene721.p Protein 5e-17 41
Xaut_4961 YP_001409397.1 two component transcriptional regulator BAC0111 Protein 1e-28 41
Xaut_4961 YP_001409397.1 two component transcriptional regulator BAC0487 Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xaut_4961 YP_001409397.1 two component transcriptional regulator VFG0473 Protein 6e-29 42
Xaut_4961 YP_001409397.1 two component transcriptional regulator VFG1390 Protein 9e-25 42