|
Name : CCV52592_1226 (CCV52592_1226) Accession : YP_001407694.1 Strain : Campylobacter curvus 525.92 Genome accession: NC_009715 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 416378 - 417436 bp Length : 1059 bp Strand : + Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAAAATTTTAGTGACGGGAACGGCCGGTTTTATCGGCTTTCATCTGGCAAATGCGCTGGCTGCGCGTGGCGATGAGGT CGTGGGGTTTGACAATATCAATGATTATTACGATGTAAATTTAAAATTCGCGCGGCTAAAAACGGCCGGCTTTGATACGA ACGAGATCGCGGCGGGCAAGCAGATCCGCTCCAAAATGAAGCCAAATTTAAGCTTCGTAAAGGGTGATCTGCAAGAGGCT CGGCTACTAAAAAGGCTATTTGGCGAGCATAAATTTGACGCCGTGGTAAATCTCGCCGCGCAAGCTGGCGTGCGCTACTC GCTAATCAATCCGCAAGCCTACATCGACGCTAACGTCACGGGCTTTTTAAATATTTTGGAGTGCTGCCGCCACAACGCGA CGCCAAATCTTGTCTATGCGAGCTCGAGCTCGGTGTATGGACTCAACGAAAATATGCCATTTTCCACGCATGAGGGCGTA AATCACCCGATCAGCCTCTACGCCGCGACCAAAAAGAGCAACGAGATGATGGCGCACACTTACAGCCATCTTTTTGGCGT GCCGACGACGGGGCTGCGATTTTTCACGGTCTATGGCCCGTGGGGTCGCCCAGATATGGCGCTGTTTTTGTTCGTTAAAG CCGCGCTTAGTGGCGGGACGATCGATGTTTTCAACTACGGCAAGATGAAGCGCGACTTCACCTATATCGACGACATCGTA AAGGGCGTGATGAAGTGCGTGGATAACCCGGCCCGCGCAAACGCCGCGTGGGACGCGAAAGCACCTGATCCGGCAAGCTC GTCCGCGCCATTTAAAATTTACAATATCGGCAACAATAGCCCCGTCGAGCTAATGGACTACATCAAGGCGATCGAGCTAA AAATCGGACGCGAGATAAATAAAAATTTCCTTCCGCTGCAAGCTGGCGACGTGCCTGCGACGTATGCGGACGTGAGCGAT TTGATCGCTGATTTTGACTACAAGCCAAACACCAGCGTAAATGAGGGTGTAGCGCGCTTTATCGAGTGGTATAGTGAGTT TTACGGAGCTAAAATTTGA Protein sequence : MKILVTGTAGFIGFHLANALAARGDEVVGFDNINDYYDVNLKFARLKTAGFDTNEIAAGKQIRSKMKPNLSFVKGDLQEA RLLKRLFGEHKFDAVVNLAAQAGVRYSLINPQAYIDANVTGFLNILECCRHNATPNLVYASSSSVYGLNENMPFSTHEGV NHPISLYAATKKSNEMMAHTYSHLFGVPTTGLRFFTVYGPWGRPDMALFLFVKAALSGGTIDVFNYGKMKRDFTYIDDIV KGVMKCVDNPARANAAWDAKAPDPASSSAPFKIYNIGNNSPVELMDYIKAIELKIGREINKNFLPLQAGDVPATYADVSD LIADFDYKPNTSVNEGVARFIEWYSEFYGAKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-90 | 58 |
