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Name : nifJ (CCV52592_0916) Accession : YP_001407586.1 Strain : Campylobacter curvus 525.92 Genome accession: NC_009715 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 296720 - 300334 bp Length : 3615 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGAGTAAAATAATGAAAACTATGGACGGAAACGAGGCTGCGGCGCACGCGGCTTACGCATTTACGGAGGTCGCAGGCAT CTACCCGATCACTCCTAGCTCGCCGATGGCGGACTACACCGATATGTGGGCGGCTCAGGGCAAGAAAAATCTATTTGGTA TGCCCGTTAAAGTCGTCGAAATGCAAAGCGAGGGCGGAGCTGCGGGCACGGTGCATGGCTCACTGCAAGTAGGCGCACTG ACCACGACCTACACGGCTTCGCAGGGCTTGCTTTTAAAGATCCCAAATATGTATAAGATCGCGGGGCAGCTGCTGCCTGG CGTCATCCACGTTAGCGCGCGCTCCTTGGCGGCTCAGGCGTTATCGATCTTTGGCGATCACCAAGACATCTACGCCTGTC GCCAAACGGGCTGGGCGATGCTAGCTAGCGGCTCGGTGCAAGAGGTGATGGATATCGCGGGCGTCGCTCACCTTGCCGCG ATAAAGGGGCGCGTGCCGTTTTTGCACTTTTTTGACGGCTTTCGCACGAGCCACGAGATACAAAAAGTCGAGGTGATGGA TTATTCTCACTTTGATAGGCTTCTTGATAAAGACGCGGTGCAAAAATTTAGAGACGAGTCGCTAAATCCAGAAAGCCCAA AAACCCGCGGCACAGCGCAAAACGATGACATCTACTTCCAGACAAGAGAGCTTAGCAATCGCTTCTACGACGCCGTGCCT GACATCGTGGCGGAGTATCTGCGTGAAATTTCAGCTATAACCGGACGCGAGTATAAGCCCTTTAACTACTACGGCGATCC TGACGCGACGCGCGTTGTGGTGGCGATGGGTTCGGTGACGCAGACACTTGAAGAAGTGGTCGATCATCTACGCGCAAAGG GCGAAAAGGTGGGCGTCATCAAAGTGCATCTCTATCGTCCGTTTAGCGTGAAATATCTCTTTGATGTGATGCCAAAAAGC GTGCGAAGCATCGCCGTGCTAGACCGCACGAAAGAGCCCGGTAGCCTGGGCGAGCCGCTATATCTTGACATCAAAGCGGC ATTTTACGGACGCGAAAACCAGCCCGTGATCGTGGGCGGCAGATACGGTCTAAGCTCAAAGGACGTTGATCCCGCACAAA TGCTGGCCGTGTTTGAAAATTTAAATTTAGAGCGACCAAAGGACGGCTTTACCGTCGGTATCGTCGATGATGTGACATTT ACATCATTACCTGTCGGGGAGAAAATTTCACTAAGTGACGAGAGCGTCAAAGAGTGCCTATTTTACGGACTTGGCGCGGA CGGCACGGTCGGAGCGAATAAAAACTCCATCAAAATCATCGGCGACAAGACCCCGCTTTACGCGCAGGCGTATTTTGCCT ACGACAGCAAAAAATCAGGTGGCTACACGCGCTCGCACCTACGCTTTGGTAAAAACCCGATCCGCTCGACCTACCTCGTC TCAAACCCGCATTTTGTCGCCTGCTCGGTCGCGGCGTATCTTGACATCTACGACGTGATCGGCGGTATCAGACAGGGCGG AACGTTTCTTTTAAATTCCATCTGGGACGCGGCTGAAACTGTGGCGAAGCTACCAAATAAAGTAAAGAAAATTTTAGCCC AGCGAAGCGTAAATTTTTACATCATCAACGCCACCAAACTCGCCCGCGAAATAGGGCTCAAAAACCGCACGAACACGATC ATGCAGTCGGCGTTTTTCAAGCTTGCAGACATCATCCCTTTTGAAGACGCGCAAAAATACATGAAAGAATACGCCCACAA AGCCTACGCCAAAAAGGGCGAAGCGATCGTGGAGATGAACTACAAGGCGATCGACGTGGGCGCTGACGGACTGGTGAAGG TCGCGATCGATCCTGCGTGGGTAAATTTAAGCGAGGACAACCATAGCGGCGTGAGTGCGTATAGGGGCAATAAATTTATC GAAAATATCGTTAAACCGATCAATGCCGCGCAGGGCGACAGCCTGCCGGTCTCGGCGTTTTTGGGTTTTGAGGACGGACA TTTTGAAAACGGCTCGACAGCTTACGAGAAGCGCGGTATCGGCGTCATGGTGCCAAAGTGGATCGAGGGCAACTGTATCC AGTGCAACCAGTGTGCCTTCGTCTGTCCGCACGCGGTCATCCGCCCGTTTCTCATCAATGACGAGGAGTTAAATTCCGCC CCGCAAAGCGTCAAAGATCACGTCCTGGACGCAAAAGGCAAAGAGCTCAAAGGGCTAAAATATAAAATTCAAGTCAGTCC GCTTGACTGCACCGGCTGCGAGCTTTGCGCGCAAAACTGCCCGAGCAAGGAAAAGTCGCTCGTGATGGTGCCTCTTGGCG AGGAGCTTGATAAAAACGAGCAAATTAGCGCTGATTATTTATTTAAAAATGTGAGCTACAAAGACGATCTCATGAGCAAA GAAAGCGTGAAAGGATCGAGCTTCGCACAGCCGCTGTTTGAGTTTCACGGAGCGTGTCCGGGGTGCGGCGAGACGCCATA TATCGGGCTCATCACGCGCCTTTTTGGCGAGCGCATGATCGTGGCAAACGCCACAGGATGTAGCTCTATTTATGGAGGTA GCGCGCCTAGCACGCCATACACGACGAACAAAGACGGACACGGCGTGGCGTGGGGAAATTCGCTATTTGAGGATAACGCC GAATTTGGCATGGGTATGAACGTAGCGGTCGAGACCATCCGCCACCGCATCGAAGACATCATGCTTCGCACCAAGGATGC CGTGCCAAACGCACTCGCCGCACTTTACACCGACTGGATAAATTTCAAAAACGACGGCGAAAAGAGCGCGCAGATCCGCG ATATGCTAGTTAAAATTTTAGAGCAAAATTTGGGCGCTCCTGGCGTGCGCGAAATTTTAAGCCTCAAAAAATATCTCGCC AAAAAATCGCAATGGATCATCGGTGGCGACGGCTGGGCGTATGACATCGGCTTTGGCGGGCTAGACCACGTGCTAGCAAG CGGTGAAAACGTCAATGTGCTGGTGCTTGACACAGAGGTGTATTCAAACACAGGCGGTCAAAGCTCCAAATCAAGCCGCG CTGGCTCGATCGCGCAATTTACCGCCTCGGGCAAACCGATGCAAAAAAAGGATCTGGGCTACATCGCGATGACCTACGGC AACATCTTCGTCACGCAGATAAACTCCAACGCCAGCCAAGCAAACACGATAAAAGCGATCATGGCGGCGGAGGCTTACGA AGGTCCAAGTCTCGTCATCGCCTACTCGCCGTGTATCGCGCATGGTATCAAAGGCGGCATGGCACACTCTGGCGGACAGG GTGAGCTAGCGACGAAGTGCGGCTACTGGCCGACCTACACCTACGACCCGCGCCTCATGAAAGAGGGCAAAAATCCTCTG AAAATGACGTCAAAAGAGCCTGACTGGACGCTTTACGAGGAGTTTTTGCTAAACGAGGTGCGCTACAACTCGCTCAAAAA GACAAACCCCGAGCACGCAGACGAGCTACTACGCAAAAATAAAGAGGACGCCAAACGTCGCTACCGCCAGCTAAAACGCC TTGCAATGGCTGATTTTAGCGATGAGGTGGAGCAAGAAATTTCTGCTGACGCGCAGACGAGCGAGACCGCTACCGACATG GCGGTAGAGGCGTAA Protein sequence : MSKIMKTMDGNEAAAHAAYAFTEVAGIYPITPSSPMADYTDMWAAQGKKNLFGMPVKVVEMQSEGGAAGTVHGSLQVGAL TTTYTASQGLLLKIPNMYKIAGQLLPGVIHVSARSLAAQALSIFGDHQDIYACRQTGWAMLASGSVQEVMDIAGVAHLAA IKGRVPFLHFFDGFRTSHEIQKVEVMDYSHFDRLLDKDAVQKFRDESLNPESPKTRGTAQNDDIYFQTRELSNRFYDAVP DIVAEYLREISAITGREYKPFNYYGDPDATRVVVAMGSVTQTLEEVVDHLRAKGEKVGVIKVHLYRPFSVKYLFDVMPKS VRSIAVLDRTKEPGSLGEPLYLDIKAAFYGRENQPVIVGGRYGLSSKDVDPAQMLAVFENLNLERPKDGFTVGIVDDVTF TSLPVGEKISLSDESVKECLFYGLGADGTVGANKNSIKIIGDKTPLYAQAYFAYDSKKSGGYTRSHLRFGKNPIRSTYLV SNPHFVACSVAAYLDIYDVIGGIRQGGTFLLNSIWDAAETVAKLPNKVKKILAQRSVNFYIINATKLAREIGLKNRTNTI MQSAFFKLADIIPFEDAQKYMKEYAHKAYAKKGEAIVEMNYKAIDVGADGLVKVAIDPAWVNLSEDNHSGVSAYRGNKFI ENIVKPINAAQGDSLPVSAFLGFEDGHFENGSTAYEKRGIGVMVPKWIEGNCIQCNQCAFVCPHAVIRPFLINDEELNSA PQSVKDHVLDAKGKELKGLKYKIQVSPLDCTGCELCAQNCPSKEKSLVMVPLGEELDKNEQISADYLFKNVSYKDDLMSK ESVKGSSFAQPLFEFHGACPGCGETPYIGLITRLFGERMIVANATGCSSIYGGSAPSTPYTTNKDGHGVAWGNSLFEDNA EFGMGMNVAVETIRHRIEDIMLRTKDAVPNALAALYTDWINFKNDGEKSAQIRDMLVKILEQNLGAPGVREILSLKKYLA KKSQWIIGGDGWAYDIGFGGLDHVLASGENVNVLVLDTEVYSNTGGQSSKSSRAGSIAQFTASGKPMQKKDLGYIAMTYG NIFVTQINSNASQANTIKAIMAAEAYEGPSLVIAYSPCIAHGIKGGMAHSGGQGELATKCGYWPTYTYDPRLMKEGKNPL KMTSKEPDWTLYEEFLLNEVRYNSLKKTNPEHADELLRKNKEDAKRRYRQLKRLAMADFSDEVEQEISADAQTSETATDM AVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 79 |
