Gene Information

Name : CCV52592_1762 (CCV52592_1762)
Accession : YP_001409166.1
Strain : Campylobacter curvus 525.92
Genome accession: NC_009715
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 1906110 - 1907252 bp
Length : 1143 bp
Strand : -
Note : identified by match to protein family HMM PF01053; match to protein family HMM PF01212

DNA sequence :
ATGAAAATAGACACTTTGATCGTAAAAGGCATAGAAGCCAAAGACAACCCGTATAACGCCGTCGTGCCGCCTATCGTGCT
CTCAAGCACCTTTGCGCAGGAGGGGCTGGGCGAATTTGGCGAGTTTGCCTACTCTCGTAGCGCGAATCCTACAAAAAAGG
CGTTCGAGGAACTTTTTGCAAAATTTGAAGGCTCTAAATACAGCTTCGCGCTAGCCTCGGGGATGGCCGCTACGACAGCG
GTATTTAACCTCTTAAAAAGCGGCGACAAGGTGCTTTTAAACAACAACGTCTATGGCGGCACCTATCGCTACGCAAGCGG
AATTTTTAAAAATCAAGGCATCTCCTACGAGCTCGTGGACGATCTGAATTTGATAGAAGAGGACGACATCACGGACGACG
TGAAGATGGTCTTCATCGAGACGCCATCAAACCCGCTACTTCGCGTGACAGACATCAAACGTATCGTGAATTTAGCCCAC
AAAAAGGGCGCTCTAGTCGTCGTGGATAACACGTTTTTGACGCCGTATTATCAAAGGTTGCTACCTCTTGGCGTAGATAT
CGTGGTTTACAGCGCGACCAAATACATCGGCGGGCATGCAGACGTCATCGCGGGCATCGTCAGCACAAACGACGACGCTT
TGGCCGATAGGATAGCGTTTATGAAAAACACCTTGGGAGCGACGCTTTCGCCTACGGACGCTTATTATCTGATCCGTGGG
CTGAAGACGCTTAGCGTGCGATTTGACAGGCAGACGCAAAATACGCACAAGATAGTGGAATTTCTAAAATCAAATTCGGC
GGTCAGGACGGTTTATTACGCCGGGTCGTATTCGGAATTTGAAAAAAGAGCGCAAGAAGCACAGGCTAGCGACATCGGTG
CGGTCATCTCGCTCGAGCTAGCCGAGGGCTACGACTATGAGAAATTTGCAAAAAGTCTGCATCTGTTTGACCTGGCCGTC
AGTCTGGGAGGAGTCGAGAGTCTCATCTGCCATCCGGCCTCGATGACGCACGAGTCATATCCAAAAGAGCTTCAAGAAAA
GATCGGTATCTCGCAAAACCTACTTCGTCTGGCTATCGGCATCGAAAATGCGGACGATCTGATAGATGATCTAAAACAGG
CTTTGATAAAGGCCAAAAAATAA

Protein sequence :
MKIDTLIVKGIEAKDNPYNAVVPPIVLSSTFAQEGLGEFGEFAYSRSANPTKKAFEELFAKFEGSKYSFALASGMAATTA
VFNLLKSGDKVLLNNNVYGGTYRYASGIFKNQGISYELVDDLNLIEEDDITDDVKMVFIETPSNPLLRVTDIKRIVNLAH
KKGALVVVDNTFLTPYYQRLLPLGVDIVVYSATKYIGGHADVIAGIVSTNDDALADRIAFMKNTLGATLSPTDAYYLIRG
LKTLSVRFDRQTQNTHKIVEFLKSNSAVRTVYYAGSYSEFEKRAQEAQASDIGAVISLELAEGYDYEKFAKSLHLFDLAV
SLGGVESLICHPASMTHESYPKELQEKIGISQNLLRLAIGIENADDLIDDLKQALIKAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-75 45
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-74 44
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-56 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCV52592_1762 YP_001409166.1 methionine gamma-lyase BAC0207 Protein 7e-58 44