Gene Information

Name : CHAB381_0952 (CHAB381_0952)
Accession : YP_001406513.1
Strain : Campylobacter hominis ATCC BAA-381
Genome accession: NC_009714
Putative virulence/resistance : Virulence
Product : general glycosylation pathway protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 888164 - 888769 bp
Length : 606 bp
Strand : -
Note : identified by match to protein family HMM PF02397

DNA sequence : 
ATGTATAGGTTTTTTTTAAAAAGAATTTTAGATTTTTTAATGGCTTTGATTTTGATAATTTTAACATCGCCTTTAATGTT
GATTACATATTTTTTAATTAAAAAACATATAAGCAAAAACGCGATTTTTACACAACTTCGCCCTGGTTTAAATGAAAAAA
TTTTTAAAATTTATAAGTTTAAAACAATGAACGATGAATGTGATGAAAATGGAAAACTTTTGCCTGATGAACTTCGCTTG
AATGATTACGGTAAGAAAATCAGAGCTCTAAGTCTTGATGAATTGCTGCAACTTTTCAATGTTTTAAAAGGTGATATGAG
TTTTATAGGGCCTCGTCCTTTATTGCCGGAATACCTGCCGCTTTATAATGACGAACAAAAACTTCGCCACAGTGTGCGTC
CGGGCATTACAGGCTTGGCGCAAGTTAACGGCAGAAACGCTATTTCATGGCGGAAAAAGTTTGAGTTCGACACATTTTAC
GCAAAAAATTTAAGTTTTTTACTGGATATTAAAATCGCATTTTTAACAGTTAAAAAAGTCATTAAAAAAGAGGGCGTAAA
TAAAGATGGAATGGCAACTACGGAGAAATTTAATGGCAAAAACTGA

Protein sequence : 
MYRFFLKRILDFLMALILIILTSPLMLITYFLIKKHISKNAIFTQLRPGLNEKIFKIYKFKTMNDECDENGKLLPDELRL
NDYGKKIRALSLDELLQLFNVLKGDMSFIGPRPLLPEYLPLYNDEQKLRHSVRPGITGLAQVNGRNAISWRKKFEFDTFY
AKNLSFLLDIKIAFLTVKKVIKKEGVNKDGMATTEKFNGKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHAB381_0952 YP_001406513.1 general glycosylation pathway protein VFG1309 Protein 1e-25 41