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Name : CHAB381_0849 (CHAB381_0849) Accession : YP_001406413.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 786442 - 789018 bp Length : 2577 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGCAAAGTATAATGGAAATTTTAACAGATAAAATGACCGGGCTGATTGAAAGCAGCGCGTCTTTAGCTATTCATAGCAA AAATAGTGAAATAAGAAATTTACACTTGCTTTGGGCACTTACCGTCGATAGCAGTTCGATTTTAAATCAAATTTTTAATA AATTCGATATAAATGCAAAAGCCGTCGAGCTTGAAATAAAAAGTAAAATTTCAAATTTACCCACAAGTTCAAATGTAAGT AAAGAAAATATCAAAATTTCAAACGAACTTGCAAATTCTTTGGAAAATGCAAAAGGGTTGATGAGCGCTACAGGAGATAA ATTTATAGCCGTTGATACATGGATTTCAGCTAATCTTGAAAACGCTGAAATTAAGGAAATTTTGAGTAAATTTTGCGATA TTTTGGAATTTAAAAAAGAGCTCGAAAATTTAAGATCTGGCAAAAAAATAGATTCTAAAACAGGCGATGAAACACTTGAA AGTTTGTCGAAATTTGGAATTGATTTAACTGCAAAAGCCATAAACGGAGAATTGGATCCGGTAATAGGCAGAGATGAAAT TATAACCAGACTTATGCAAATTTTAATTCGCAAAACAAAAAACAATCCTATTCTTATAGGAGAACCAGGTGTCGGTAAAA CTGCCGTTGTAGAAGGTTTGGCCGAACTTATCGCAAAAAAAGAAGTTCCTACAAGTCTTCAAAATTACCGCGTAGTGGCA CTTGATATGAGTGCATTGATTGCCGGTGCAAAGTATCGAGGAGAATTCGAAGATCGTCTTAAAGCCGTTATTAAAGAGGT AAAACAAGCCGGAAACGTTATACTTTTTATTGATGAAATTCATACTATTGTAGGAGCCGGAGCAAGTGAAGGAAGTATGG ATGCGGCAAATATCTTAAAACCGGCTCTTGCACGTGGTGAACTTCATACTATAGGAGCTACTACTTTAAAAGAGTATAGA AAATATTTTGAAAAAGATTCAGCATTGGGAAGGCGTTTTCAACCGATAAATGTGCCTGAGCCAAGTGTAGCTGAAGCTTT ACAAATTTTGCGCGGAATAAAAGAAAAGCTTGAAGTTCATCATAATGTAACGATTACTGATAGTGCTCTTGTGGCGGCTG CTAAGCTAAGTGACAGATATATTTCAGACAGATTTTTGCCTGATAAAGCAATTGATTTGATTGACGAAGCTGCGGCGGAG CTTAAAATGCAAATAGAAAGCGAACCGTTTGAACTTGCAAAAGCAAAACGCGACATAATTACTCTTCAAGTCGAACGTGA AGCATTAAAAATGGAAGAAAACGATAAAAATAAACCAAGACTCGAAGAAATTGATAAAGAAATAGAAAATTTAACTGAAA AACAAAAAGATTTACAAGCTAAATTTGAAAATGAAAAAAGTGTATTTAATGCAATCAGCGAGGCTAAAAAAAATATAGAG AGCCTTAAAAATGAAGCCAATAACGCAAAAAGAAACGGTGAATTAAATAAAGCTGCCGAAATAGAATACGGAAAAATTCC GGCTCAAAGTGCAAAAGTAACGCAGTTGGAACAAAAATGGGAAAATATGAAAGAAGCCGGTGTACTTTTGAAAAATCAAG TTGACGAGGAGATGGTCGCAGGAATTTTAAGCAAATGGACAGGAATCCAAGTATCAAAAATGCTAACAAGCGAAAAAGAA AAATACCTAAATATAGAAAACCATTTAAAAGAAAGTGTAGTAGGACAAGATATGGCTCTCGGGGCAATTGCAAAAGCGGT AAAACGAAATCGTGCAGGGCTTAACAGCGAAAATCGTCCGATAGGAAGTTTTTTATTTTTAGGACCTACAGGAGTCGGTA AAACCGAAAGCGCCAAAGCTTTAGCGAAGTTTCTTTTTGACGACGAAAAAGCTCTTATAAGATTTGATATGAGTGAATAT ATGGAAAAAATCAACGTTTCAAGGCTTCTTGGAGCGGCTCCTGGATACGTCGGATATGAAGAGGGTGGACAATTAACAGA AGCGGTCAGAAGAAAGCCGTATTCGGTGCTGCTTTTTGATGAAATAGAAAAAGCTCACAAAGATGTTTTTAATATCCTAC TTGGAATTTTAGATGACGGCAGAGCTACCGATAACAAAGGCGTTACAGTCGATTTTAAAAATACCATTATTATTTTAACT TCAAATATAGGCTCCGATATAATTATGAATTTGGATGAAAAAAATAGAGAAAGCGCTATAAAATCGGAGTTAAAAAAGTA TTTTAAGCCCGAGTTTTTAAACCGTTTGGATGATATTGTAGTTTTTAACCCTTTAAATAAAAATAATCTTATTGAAATCG TTGGAATTATGTTTAAAAAGTTATCAAAAACATTGCAAAATCGTGGAATTTCAGCAGTTTTAACGCAAAATGCCGAAAAA TTCATAGCAAGCGCCGGATTTGATATCCAATATGGTGCAAGACCGTTAAGACGCGCACTTTATGATTTGGTTGAAGATAA AATCGCAGATATGATTTTAAGCGACGAAATAAAAAGCGGCGATAATATAAAAATAGACTCAAATGGTGAAAAAATCGAAA TTTCAGTGGAGAAATAA Protein sequence : MQSIMEILTDKMTGLIESSASLAIHSKNSEIRNLHLLWALTVDSSSILNQIFNKFDINAKAVELEIKSKISNLPTSSNVS KENIKISNELANSLENAKGLMSATGDKFIAVDTWISANLENAEIKEILSKFCDILEFKKELENLRSGKKIDSKTGDETLE SLSKFGIDLTAKAINGELDPVIGRDEIITRLMQILIRKTKNNPILIGEPGVGKTAVVEGLAELIAKKEVPTSLQNYRVVA LDMSALIAGAKYRGEFEDRLKAVIKEVKQAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR KYFEKDSALGRRFQPINVPEPSVAEALQILRGIKEKLEVHHNVTITDSALVAAAKLSDRYISDRFLPDKAIDLIDEAAAE LKMQIESEPFELAKAKRDIITLQVEREALKMEENDKNKPRLEEIDKEIENLTEKQKDLQAKFENEKSVFNAISEAKKNIE SLKNEANNAKRNGELNKAAEIEYGKIPAQSAKVTQLEQKWENMKEAGVLLKNQVDEEMVAGILSKWTGIQVSKMLTSEKE KYLNIENHLKESVVGQDMALGAIAKAVKRNRAGLNSENRPIGSFLFLGPTGVGKTESAKALAKFLFDDEKALIRFDMSEY MEKINVSRLLGAAPGYVGYEEGGQLTEAVRRKPYSVLLFDEIEKAHKDVFNILLGILDDGRATDNKGVTVDFKNTIIILT SNIGSDIIMNLDEKNRESAIKSELKKYFKPEFLNRLDDIVVFNPLNKNNLIEIVGIMFKKLSKTLQNRGISAVLTQNAEK FIASAGFDIQYGARPLRRALYDLVEDKIADMILSDEIKSGDNIKIDSNGEKIEISVEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-148 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHAB381_0849 | YP_001406413.1 | chaperone ClpB | VFG2076 | Protein | 2e-108 | 42 |
