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Name : CHAB381_0628 (CHAB381_0628) Accession : YP_001406215.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 574301 - 576022 bp Length : 1722 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAAGGAGTTTTATAAAAAAAGATTTGCTCTTACAGATAGGGGAGCTAGAAATTTAACCAAAGCAACACTATTCTCATT TTTTGTCTATTGTATAAATATGCTTCCTGTAATAATACTAATGTTTTTTGCTCAAGAAGTATTGGAGAATATCGACAAAA GCAGTGGTTTTTATATAGTATTTTCAGTTTTGACCTTGATAGCAATGTATATTTTGCTTTCTATTGAATACGATAAACTG TATAGCACAACATATCAAGAAAGTGCTGATTTAAGGATAAGAACAGCAGAAAACTTATCAAAACTGCCTCTATCATACTT TTCTAAACATGATATTTCTGATCTCTCGCAAACAATAATGGCTGATATTGAGGGTATAGAACATGCAATGAGCCACTCGA TACCAAAAGTTGGTGGTATGGTACTCTTCTTCCCGCTAATATCTGTAATGATGTTAGTAGGAAATGTAAAAATGGGCTTA GCTGTAATTATTCCATCGCTCTTAAGCTTTATCTTTATACCTTTATCTAAAAAATATCAAGTTAAAGGGGAGAAAAAATA TTATGACATCTTAAGAGAAAACTCAGAAAACTTTCAGGAAAATATCGAAATGCAAATGGAGATTAAAGCATATGGCTTAT CAGAGGAAATGAAAGAAAAGCTATATGAAAAAATGGATAAAAGTGAAAAAGTACACTTAAAGACAGAAATGGGGATTGTT CTAACTATGTCACTTTCATCAATATTTAGCTTTATATCTCTTGCTGTTGTGATATTTGTTGGCGCAAATTTAATTATTAA TAAAGAGATAAGTGTTCTATACCTTATAGGATATTTACTAGCGGCTATGAAGATAAAAGACTCTCTTGATGCATCTAAAG AGGGCATGATGGAAATATTTTATTTAACGCCAAAGATTGAAAGACTAAAAGAAATTCAAAATCAAAATCTCCAAGAGGGC AAAGATTATAAGTTAAAAAAATTTGATATTGATCTAAAAGATGTTGAATTTGCTTACAATAAAGACGCAAAAGTTTTAAG GGGAGTTAGTTTTAAAGCAAAGCAGGGAGAGGTCACTGCTTTGGTAGGCGCAAGTGGCTGCGGTAAAACAACTATCTTAA AACTTATATCAAGACTTTATGATTATGACGAGGGACAAATCCTAATCGATGGCAAAGATATCAAAGAGATATCAACAGAA TCACTTTTTGACAAGGTTTCAATAGTTTTTCAAGATGTGGTTCTTTTTAATCAAAGTGTTATGGAAAATATTAGGATTGG AAAGCAAGAAGCAAGTGATGAAGAAGTTAAAAGAGCAGCAAAACTTGCCAATTGCACAGACTTTATAGAAAAAATGGATA AGGATTTTGATACAGTTATTGGTGAGAATGGTGCTGAGCTATCTGGTGGTGAAAGACAAAGACTATCAATAGCAAGAGCT TTTTTAAAGGACGCACCAATATTAATATTGGATGAAATAGCAGCAAGCCTTGATGTAGATAATGAGAAAAAAATTCAAGA GTCTTTAAATAATTTGATTAAAGATAAAACAGTTGTTATCATTTCACACAGAATGAAATCCATAGAAAATGCGGACAAGA TTGTAGTTCTTGAAAACGGAAGAGTAGAAAACGAAGGTAAGCATGAAGAGCTTTTACAAAAATCAAAAGTTTACAAGAAT TTAATAGAAAAAACAAAAATGGCAGAAGAATTTATCTATTAG Protein sequence : MKEFYKKRFALTDRGARNLTKATLFSFFVYCINMLPVIILMFFAQEVLENIDKSSGFYIVFSVLTLIAMYILLSIEYDKL YSTTYQESADLRIRTAENLSKLPLSYFSKHDISDLSQTIMADIEGIEHAMSHSIPKVGGMVLFFPLISVMMLVGNVKMGL AVIIPSLLSFIFIPLSKKYQVKGEKKYYDILRENSENFQENIEMQMEIKAYGLSEEMKEKLYEKMDKSEKVHLKTEMGIV LTMSLSSIFSFISLAVVIFVGANLIINKEISVLYLIGYLLAAMKIKDSLDASKEGMMEIFYLTPKIERLKEIQNQNLQEG KDYKLKKFDIDLKDVEFAYNKDAKVLRGVSFKAKQGEVTALVGASGCGKTTILKLISRLYDYDEGQILIDGKDIKEISTE SLFDKVSIVFQDVVLFNQSVMENIRIGKQEASDEEVKRAAKLANCTDFIEKMDKDFDTVIGENGAELSGGERQRLSIARA FLKDAPILILDEIAASLDVDNEKKIQESLNNLIKDKTVVIISHRMKSIENADKIVVLENGRVENEGKHEELLQKSKVYKN LIEKTKMAEEFIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0584 | NP_814349.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 0.0 | 64 |
| ef0102 | AAM75305.1 | EF0102 | Not tested | Not named | Protein | 0.0 | 64 |
