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Name : CHAB381_0627 (CHAB381_0627) Accession : YP_001406214.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding/permease protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 572563 - 574317 bp Length : 1755 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAATATTTATAAAAAGCTATTTGCTTATGTAGGGGATAAAAAATATCTTGGAGCTTTTGCTATAGCTTTTTCTGTTAT ATCTGCAGTGCTTACAGTATATGGATATTATTTAATCTACAAATTTTTAGATAATTTAATAATTAATTCAAATTTATCTG GCGCAGAGAGTTTAGCGTTAAAATCAGTCTTTGCATTAACAGGTGGAGCAATATTTTATTTTGTTTCAGGAATGTTTTCA CACGTTTTGGGATTTAGGCTTGAAACAAATTTAAGGAAAAGAGGGATTGATGGCCTAGAGAAAGCAAGCTTTAGGTTCTT TGACTTGAACCCTTCTGGAAAAATTAGAAAGATCATAGATGACAATGCCGCACAAACTCACCAGGTGATAGCCCACATGA TTCCAGATAGCTCTCAAGCAATAATTACACCTTTTCTTGTGCTTGTGCTTGGTTTTATAGTAAGTATAAGAGTAGGCATC ACTTTACTTGCTCTTACAATAATCGGAAGCGTAATTTTAGGAGCAATGATGGGCGAGGGAAGATTTATGAAGATATACCA AGAAGCCCTATCTAAACTAAGTGCTGAAACTGTCGAGTACGTTAGAGGAATGCAAGTTGTAAAAATATTTAGAGCAAATG TAGAGTCATTTAAAAGTTTCTACAAGGCAATAAAAGATTACTCAAAATATGCTTATGATTATTCCCTATCTTGTAAAAAG CCTTATGTTTTGTATCAGTGGTTATTTTTTGGTCTAGTTGCTATCTTAATTATTCCGGTTGTCTATTTTATGACTAGCTT AGGTAGTGCCAAGATGATATTGCTTGAGCTTATCATGATTTTATTTTTATCGGGAGTTCTCTTTGTTTCATTTATGAGAA TGATGTGGTACTCCTTGTATATTTCTAAAGGAAATTATGCAGTAGACACTTTAGAGGCGCTTTACAATGACATGCAAAAA GATAAATTAGTGCATGGCAATCTCAATAATTTTAAAAACTTCAATATTGAGTTTGACAATGTAAGTTTTGCTTATAATGA TAAAGCTGTCATTGAAAATTTATCCTTTAAATTAGAAGAAGGAAAGTCCTATGCACTAGTCGGTTCCTCTGGATCAGGTA AATCAACAGTAGCAAAACTTATATCAGGCTTTTATAATGTCAATGAAGGAAGCATAAAGATAGGTGGCATACCAATATCT AAATATTCTAACGAAGCCCTAATTAAAGCTATCTCCTTTGTTTTTCAAGATTCGAAATTGTTTAAGAAAAGTATTTACGA CAATGTAGCTTTAGCCAATAAAGAGGCGAGCAAAGATGATGTTATGAAAGCCCTGAAATTAGCAGGATGCGATCTGATAT TAGACAAATTTCCAGATAGAGAAAATACAGTCATAGGCTCAAAAGGAGTTTATTTATCTGGAGGAGAAAAACAAAGAATT GCAATTGCTAGAGCAATTTTAAAGGATTCGAAAATTATTATTATGGATGAAGCATCGGCGTCTATCGATCCAGATAATGA GTTTGAACTGCAAAAAGCTTTCAAAAATCTTATGAAGGATAAGACAGTTATCATGATTGCTCACAGACTTTCTACAATTA AAGATCTTGATGAAATACTTGTGATGGATAATGGAAAAATTATAGAAAGAGGCTCTGACAAAGAGTTAATGTCAAGAGAT ACAATATATAAGAGACTTCAAGAGATGTTTAACAGTGCAAATGAATGGAGGGTTTCAAATGAAGGAGTTTTATAA Protein sequence : MNIYKKLFAYVGDKKYLGAFAIAFSVISAVLTVYGYYLIYKFLDNLIINSNLSGAESLALKSVFALTGGAIFYFVSGMFS HVLGFRLETNLRKRGIDGLEKASFRFFDLNPSGKIRKIIDDNAAQTHQVIAHMIPDSSQAIITPFLVLVLGFIVSIRVGI TLLALTIIGSVILGAMMGEGRFMKIYQEALSKLSAETVEYVRGMQVVKIFRANVESFKSFYKAIKDYSKYAYDYSLSCKK PYVLYQWLFFGLVAILIIPVVYFMTSLGSAKMILLELIMILFLSGVLFVSFMRMMWYSLYISKGNYAVDTLEALYNDMQK DKLVHGNLNNFKNFNIEFDNVSFAYNDKAVIENLSFKLEEGKSYALVGSSGSGKSTVAKLISGFYNVNEGSIKIGGIPIS KYSNEALIKAISFVFQDSKLFKKSIYDNVALANKEASKDDVMKALKLAGCDLILDKFPDRENTVIGSKGVYLSGGEKQRI AIARAILKDSKIIIMDEASASIDPDNEFELQKAFKNLMKDKTVIMIAHRLSTIKDLDEILVMDNGKIIERGSDKELMSRD TIYKRLQEMFNSANEWRVSNEGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0583 | NP_814348.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 7e-167 | 61 |
| ef0101 | AAM75304.1 | EF0101 | Not tested | Not named | Protein | 5e-167 | 61 |
