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Name : serS (CHAB381_0210) Accession : YP_001405817.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 186529 - 187782 bp Length : 1254 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAAACCTTAAACTGATTGAAACAAATTTTGATGAATTTAATAAAAAACTTATTGCAAAAAATGTAAAAAATGATGT ATTAAGTACTCTTTTAGAAGCTTATGATGAGCTTAAAAAAGATCGTTTAGAGTTGGAGAATTTGCAAAATTTACAAAATA CAAAAAGCAAAGAATTTGGCGAAATAATGCGTCAAAAAGGTGATGCAGGTGAGCTTAAAAAAGAGCTTTCGATAAACAAA TCAAAAATTCAAACTCAAAGCGAAATTGTAAAAGCCGCCGAAATAAAGCTTGATAAAATTGCATCCTGTGTGCCGAATAT AATAGATGATGATGTACCTTTCGGTGCTGATGAAAATGAAAATGTCTGCATAAAAAAGATTTTACAACCGCCTGTTTTTG ATTTTCAGCCGAAAGAGCATTTTGAGCTTGGTGAAAAACTCGGCTGGCTCGATTTTGAGCGCGGTGTGAAACTTAGCGGA AGTCGTTTTACTGCGATAAAAGGTATGGGTGCTAAGTTAAATTTGGCGATTATAAATTATATGATTGATTTCAATCAAAG TCGCGGTTTTGAACTTGTAAATTTGCCGTTTTTAGTAAAAGATGAAATTCTTTTCGGCACGGGACAGCTTCCGAAATTTA AAGACGATCTTTACAAAGTAGATAATGACGAGCTTTCTTTATATCTAATTCCAACTAGCGAGGTTACGGCTACGAATTTT TACAATGGTGAAATTTTAAGCGAAGATGAACTTCCTGTGAAATTTACCAGTTATAGTCACTGTTTTCGCAAAGAAGCCGG TTCCGCAGGAAAAGATACACGCGGAATGATTCGTCAACATCAATTTGAAAAAGTTGAACTTGTATCCATCACAAAGCCTG AAGATAGCGATAAAATGTTTGATGAGATGGTAAGTTGTGCGAGCGATCTGCTAAAAAGTCTTGGGCTTGCGCATCGCCAA ATGATGCTTTGTAGCGGTGATTTAGGCTTTTCAGCAGCTAAAACAATCGATCTTGAAGTTTGGCTTCCAGGACAAAATAC ATATAGAGAAATAAGTTCTATTTCAAATTGTCGCGATTTTCAGGCAAGAAGGGCAAAAATTCGCTACAAAGATAAAAATG GTAAAAACCGTCTGGTAAATACGCTAAACGGCTCATCTTTGGCAGTTGGTCGCACACTTGTAGCTATAATGGAAAACTAC CAACAAAAAGATGGCTCAATTAAAATTCCAAAAGTTTTAGAGGAATATCTTTAA Protein sequence : MINLKLIETNFDEFNKKLIAKNVKNDVLSTLLEAYDELKKDRLELENLQNLQNTKSKEFGEIMRQKGDAGELKKELSINK SKIQTQSEIVKAAEIKLDKIASCVPNIIDDDVPFGADENENVCIKKILQPPVFDFQPKEHFELGEKLGWLDFERGVKLSG SRFTAIKGMGAKLNLAIINYMIDFNQSRGFELVNLPFLVKDEILFGTGQLPKFKDDLYKVDNDELSLYLIPTSEVTATNF YNGEILSEDELPVKFTSYSHCFRKEAGSAGKDTRGMIRQHQFEKVELVSITKPEDSDKMFDEMVSCASDLLKSLGLAHRQ MMLCSGDLGFSAAKTIDLEVWLPGQNTYREISSISNCRDFQARRAKIRYKDKNGKNRLVNTLNGSSLAVGRTLVAIMENY QQKDGSIKIPKVLEEYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-84 | 46 |
