|
Name : CHAB381_1759 (CHAB381_1759) Accession : YP_001407270.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase B Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.- Position : 1681872 - 1683332 bp Length : 1461 bp Strand : - Note : identified by match to protein family HMM PF00171 DNA sequence : ATGTCAAGTTTAGAAAAAAAATACGATCTGTTTATTAATGGAGAGTTTGTAAAATCAAGCTCAAATGAGACAATAGATGT CTTTAATCCATCAAACGGAAAAATGCTTTCTACTATCACGGATGCCACAAAAGAGGATGTCGATAGCGCTGTAAAAGCGG CTAGAAAAGCTTTTAATAAATTTAAACATTCTACTGTAAATGAACGCTCGATCATACTGAATAAAATAGCTGATATTATA TATGAAAACAAAGAATTTTTGGCAAAAGTTGAAACTATGGATAACGGAAAACCGATTAGAGAGACTTTAAATGTTGATAT TCCTTATGCAGCTGAGCATTTTAGATATTTTGCCGGTGTTATTTTAGGCGAAGAGGGAAGTGCAAATGTTTTAAACGAGC AGCTTTTAAGTGTGGTTTTAAGAGAGCCGATTGGCGTTGTAGGACAGATAGTTCCTTGGAATTTTCCATTTTTAATGGCA GCTTGGAAACTGGCTCCTGTTATTGCAGCCGGTGATACAACTGTATTTAAACCGTCAAGTGAGACAAGTCTAAGCATTTT GGAGCTTATGAAACTTATCAAAGATGTGGTGCCAAAAGGTGTTGTAAATGTGATAACAGGAAGAGGAAGCAAATCGGGCG AATGGCTAAAAGAGCATCCCGGTATTGATAAGCTTGCATTTACAGGCTCAACAGCAGTCGGTAGAGATGTAGGAATTGCA GCGGCTAAAAGAATTATACCTGCGACTTTGGAGCTTGGCGGAAAAAGTGCAAATATAATATATGCTGATGCCGACATAGA AAAAGCACTTGATGGTGTTCAAATGGGAATTTTATTTAATCAAGGACAAGTTTGTTGCGCAGGAAGCAGGATATTTGTAG AAGAGGGCATTTACGATGAGTTTATAAAAAAGGCGGTCGAGAAGTTTAAAAATATAAAAGTAGGAGATCCGCTTGATAAA AATACTCAAATGGGTTCTCAAATCAATAAAAAACAAGCTGATAAAGTGCTTCATTATATAGATATCGCCTTGGAAGAGGG CGCAAAAATCGTAGTTGGCGGTAAAAGATCAGCTGCCGGAGAAGCATTTATAGAGCCTACTTTAATTGTAAATGTAACAA ATGATATGAGAGTAGCACAAGAAGAGATTTTTGGGCCTGTTGGCGTTGTTATTAAGTTTAAAAACGAAGATGAACTTATA AAAATGGTAAATGACAGCGAGTATGGTTTAGGCGGCGGTGTTTTTACAAAAGATATTACAAAAGCGTTAAGAACGGCAAG AAGTATGGAAACCGGAAGAGTTTGGATAAACTGTTACAATCAAATTCCGGCAGGTGCTCCGTTTGGTGGATATAAAAACT CTGGTATCGGCAGAGAAACTCATAAAATGATACTGAATCATTATACTCAAGCTAAAAATATTATGATTGATCTGACAGGT AAAACATCGGGTCTTTACTAA Protein sequence : MSSLEKKYDLFINGEFVKSSSNETIDVFNPSNGKMLSTITDATKEDVDSAVKAARKAFNKFKHSTVNERSIILNKIADII YENKEFLAKVETMDNGKPIRETLNVDIPYAAEHFRYFAGVILGEEGSANVLNEQLLSVVLREPIGVVGQIVPWNFPFLMA AWKLAPVIAAGDTTVFKPSSETSLSILELMKLIKDVVPKGVVNVITGRGSKSGEWLKEHPGIDKLAFTGSTAVGRDVGIA AAKRIIPATLELGGKSANIIYADADIEKALDGVQMGILFNQGQVCCAGSRIFVEEGIYDEFIKKAVEKFKNIKVGDPLDK NTQMGSQINKKQADKVLHYIDIALEEGAKIVVGGKRSAAGEAFIEPTLIVNVTNDMRVAQEEIFGPVGVVIKFKNEDELI KMVNDSEYGLGGGVFTKDITKALRTARSMETGRVWINCYNQIPAGAPFGGYKNSGIGRETHKMILNHYTQAKNIMIDLTG KTSGLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-104 | 49 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-107 | 49 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-107 | 49 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-107 | 49 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-107 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CHAB381_1759 | YP_001407270.1 | aldehyde dehydrogenase B | VFG0082 | Protein | 7e-105 | 49 |
