|
Name : CHAB381_1758 (CHAB381_1758) Accession : YP_001407269.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Unknown Product : transport protein Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 1680295 - 1681593 bp Length : 1299 bp Strand : + Note : identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808 DNA sequence : ATGCTGACAAATCCTGTTTTAGTGAGTATAATCGTGATGATGGCACTATGCCTTTTAAGATGTAATGTGATGCTTTCGAT TTTGATTTCTGCAATGATTGCTACGTTTTTAAGTTCGATTCCATTGGACAAAGCCTTATCTCTTTTCATAGACGGAATGG GTGGAAATTTGGAAACCGCGCTTTCATATATACTTCTTGGCGTAATTGCAACAGCGATTTCGAAAACAAATCTTACGACA ATTCTAGTAAATTTTGTAGCCTCTATAATAACCGGCAAAAAATATATTTTTATATTTTCAATAGCATTTTTTTCATGTTT TTCGCAAAATTTAATACCTGTTCATATTGCTTTTATACCGATTTTAATTCCACCGCTTCTTAGCGTGATGAATCGTTTGA AAATCGACAGACGCGCCGTAGCCTGCGCTCTTACATTTGCTCTTCAAACGCCGTATATTTCTTTGCCGCTCGGTTTTGGA TTGATATTTTTCGGACTTATACAAAAAGAATTGCAACACAATGGAATAAATGTCGCAATTAGCGATATCGGCTCTGTTAT GTGGCTATCAGCGATTCCTATGATTTTTGGGCTTATTCTTGCCGTTTGGTATTTTAGAAAACCTAGAGAATATAAGCAAA ACAATCAAACCGAAAATGAAAAAATAAATTATGAAAAACCGAAAATGACATATAAAGAATTTGGTGTGCTAATTGGAGTT ACGGCAACTTTTATCGTGCAACTTTTATCTTCATCAATGCCGTTGGCTGCGCTAATAGGAATTATCGCTATGATTTTAAC CGGAGGAATCAAGTATAAAAAAATGGATGAAACTTTTAACGGCGGCGTACATATGATGGGCTTTATAGCTTTTATTATGC TGGTAGCGGCAGGTTACGGCGCAGTCATTCGTGAAACGGGCGGAATAAACGAACTTGTCAATTTAGCGGCTTCTTTTTCT AACGGAAAACTTGGTGGCGCAATTTTAATGCTTGTAATAGGTCTTTTTGTAACAATGGGAATCGGCACAAGCTTCGGTAC AATTCCAATAATTGCAGCGATTTATTGTCCGCTTGCAAGCACGCTTGGCTTTAGCATTCCGGCTACAATTTTACTTATAG GAATCGCGGCGGCCGTCGGAGACGCAGGAAGCCCGGCAAGCGACAGCACCCTTGGACCTACTTCCGGATTAAACGCTGAT GGAAATCACAATCATGTCTGGGATACTTGCGTGCCTACGTTTATATTTTTTAACATACCGTTAATTGTTTTTGGTGTAAT ATTTGCGGTATTTTTGTAA Protein sequence : MLTNPVLVSIIVMMALCLLRCNVMLSILISAMIATFLSSIPLDKALSLFIDGMGGNLETALSYILLGVIATAISKTNLTT ILVNFVASIITGKKYIFIFSIAFFSCFSQNLIPVHIAFIPILIPPLLSVMNRLKIDRRAVACALTFALQTPYISLPLGFG LIFFGLIQKELQHNGINVAISDIGSVMWLSAIPMIFGLILAVWYFRKPREYKQNNQTENEKINYEKPKMTYKEFGVLIGV TATFIVQLLSSSMPLAALIGIIAMILTGGIKYKKMDETFNGGVHMMGFIAFIMLVAAGYGAVIRETGGINELVNLAASFS NGKLGGAILMLVIGLFVTMGIGTSFGTIPIIAAIYCPLASTLGFSIPATILLIGIAAAVGDAGSPASDSTLGPTSGLNAD GNHNHVWDTCVPTFIFFNIPLIVFGVIFAVFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-54 | 41 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-54 | 41 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 3e-54 | 41 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 3e-54 | 41 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 1e-55 | 41 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 1e-55 | 41 |
