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Name : kpsF (CHAB381_1749) Accession : YP_001407261.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Virulence Product : carbohydrate isomerase KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1672308 - 1673267 bp Length : 960 bp Strand : + Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGAATGAAATTTTAAAAAATGCAAAAGATGTTTTAAAACTCGAAGCTGACGAACTTATAAGACATATTGATTTAATTGG CAATGAGATTGAAAAAGCCGTCAAATTGATACTTGAATGTAAAGGAAAATTAGTCGTAACCGGTGTAGGCAAAAGCGGAC ACATAGGCGCTAAAATCGCCGCAACAATGGCAAGCACAGGAACACCAAGTTTTTTTGTGCATCCTACGGAAGCACTACAC GGCGATCTTGGAATGATAAGCAAAAACGATTTGGTGCTAGCTATTTCATATAGTGGTGAAAGTGAGGAACTGATTAGAAT TTTGCCGCATTTAAAAAGATTTGGAGTAAAAATCATAGCGATGGCAAAAAGCCCGAACAGCTCACTTGCTAAAATGGCGG ATGTTTTTATAAGCCTTGATATCGTACGCGAGGCTTGCCCTTTAGGAGCGGCTCCGACCGTATCAACCACACTGACTTTA GCGTTAGGAGATGCGTTAGCAGTTTGTTTGATGCACGAAAGAAATTTTAAAAAAGAGGATTTTGCAAATTTTCATCCAGG CGGAAGTCTTGGAAAAAGATTATTTTTAAAAGTTAGCGATGTTATGCGAACCGATGATTTACCGATTGTTAGCGACGATG TTAGTTTAAAAATTGCCATTAACACAATGACACACGGAAAACTTGGAAATGTTTTGTTAGTAGATAAAAACGGCGAGTTA GTTGCTATTTTAAGTGATGGAGATTTAAGAAGAGCCTTAATGGATGAAAATTTTGACATAAACAACAAAGCCGTAAATTT TGCAAGCAAAAATCCAAAAGTTATAGATAATCCTGAAATGTTAGCAAGCAGAGCTCTTGAAATCATAGAAAACTATAAAA TTCAAATGCTTATCGTAGTGCGAAACAACAAACCGATCGGCACACTTCATATACATGATCTGATGAAAATCGGTATTTAA Protein sequence : MNEILKNAKDVLKLEADELIRHIDLIGNEIEKAVKLILECKGKLVVTGVGKSGHIGAKIAATMASTGTPSFFVHPTEALH GDLGMISKNDLVLAISYSGESEELIRILPHLKRFGVKIIAMAKSPNSSLAKMADVFISLDIVREACPLGAAPTVSTTLTL ALGDALAVCLMHERNFKKEDFANFHPGGSLGKRLFLKVSDVMRTDDLPIVSDDVSLKIAINTMTHGKLGNVLLVDKNGEL VAILSDGDLRRALMDENFDINNKAVNFASKNPKVIDNPEMLASRALEIIENYKIQMLIVVRNNKPIGTLHIHDLMKIGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-53 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-53 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-52 | 43 |
