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Name : nifJ (CHAB381_1601) Accession : YP_001407124.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1525472 - 1529023 bp Length : 3552 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGAGCAAAATCATGAAGACTATGGACGGAAACGAAGCTGCTGCTTATGTTTCTTACGCTTTTACGGAGGTGGCAGGAAT TTATCCTATTACACCTAGTTCGCCGATGGCTGATTATACTGATGTCTGGGCAAGCCGTGGCAAAAAAAATCTTTTTGGAA TGCCCGTTAAAGTTGTTGAAATGCAAAGTGAAGGCGGCGCTGCCGGAACTGTGCATGGTTCGCTTCAAGCAGGTGCGCTT ACTACGACCTATACAGCCGCACAAGGTTTGCTTTTAAAAATTCCGAATATGTATAAAATTGCAGGACAGATGCTTCCGGG AGTTATCCACGTTGCAGCCAGATCGCTTGCTGCACAAGCACTTTCAATCTTTGGAGATCACCAAGATGTTTATGCCTGTA GACAAACCGGTTTTGCAATGCTTTCGAGTGCAAGTGTACAGGAAGTTATGGATATCGGCGGTATTGCTCACTTAGCCGCA ATCAAAGGTCGCGTACCATTTCTACACTTCTTCGACGGTTTTCGCACAAGCCACGAAATTCAAAAAATAGAGGTTATGGA TTACGCAGATTTCGATAAACTTTTAGATAGAAAAGCCGTTCAAGCTTTTCGCGATAATGCACTGAACTCAGAACATCCAA AAACACGTGGAACTGCACAAAACGATGATATATATTTCCAAACAAGGGAGCTTTCAAATAAATATTATGAAGCAGTTCCT GATATTGTAGCCGATTATATGGCTGAAATTTCAAAAATCACAGGCAGAGATTATAAACCGTTTAATTATTACGGCGCAAA AGACGCTACAAATATCATAGTTGCAATGGGTTCTGTAAATGAGGCGCTGGAAGAAGTTGTGGATTATTTGACAAGCAAAG GCGAAAAAGTCGGCGTTATAAAAGTTCATCTTTATCGACCGTTCAGTCTAAAATATTTCTTTGACGTATTACCAAAAAGC GTTGAAAGAATCGCTGTTTTAGACCGCACGAAAGAGCCTGGAAGTATTGGCGAACCGCTTTATTTGGATATAAAATCAGC ATTTTACGGAAATAAAAAAGAACCGTTGATTATAGGCGGACGCTACGGCTTGAGTTCAAAAGACGTTGATCCTGCACAAC TTATCGCAGTTTTTGAAAATTTAAAATCAAAAGAGCCGAAAAATCGCTTTACAGTCGGTATTGATGATGATGTTACTTTT ACTTCACTAAAAGTAGGCAAAAAAATTTCACTTGGCGATCAAGACGCGATAGAGTGTTTATTTTATGGACTTGGAGCAGA CGGAACTGTAGGAGCTAATAAAAACTCAATTAAAATCATCGGAGATAAAACCGATCTTTATGCGCAAGCTTATTTCGCTT ATGACAGTAAAAAATCAGGCGGATATACAAGAAGCCATTTAAGATTTGGCAAAAAACCGATCCGCTCAACTTATCTGGTA TCAAATCCGCACTTCGTAGCTTGCTCGGTTGCGGCTTATCTTGATGTATATGACGTAGTAGATGGGATACGTGAAGGCGG CACTTTTTTATTAAATTCAATTTGGGATGCAAAAGAGACGATTGAAAAAATTCCAAACAAAGTAAAAAGAATTTTAGCTG AGAGGAAAGCTAAATTTTATATCCTGAATGCAACAAAACTTGCTTCTGAAATAGGACTTGGAAACCGCACAAATACAATT ATGCAATCAGCATTTTTTAAACTTGCAAACATAATTCCTTTTGATGACGCAAAAGCTTATATGAAAGAGTATGCTAAAAA AACTTACGGCAAAAAAGGCGATAAAATTGTTCAAATGAATTATGATGCGATTGACCGCGGTGCAGATGGACTTATAGAGA TAAAAGTAGATCCTGCGTGGATAAATCTTAAAGATGAAACTACAAATGAACACGATAAATACAAAGGTGACAAATTTATA GAATCTGTTGTAAAACCTATAAATGCGGCACGCGGCGATAAACTTCCTGTTTCAGCATTTTTAGGACACGAAGACGGCAG TTTTGAAGCGGGCACTACAAAATATGAAAAACGTGGTGTTGGTGTAATGGTGCCAAAATGGATAAAAGAAAATTGTATCC AATGCAATCAATGCGTTTTTGTTTGCCCTCATGCTGTAATTCGCGCATTTTTGCTTGATGAAAAAGACGAACAGAATTCA CCTGAGAGTTTAAAACCTAATTTGATTGATGCAAAAGGCAAAGATGTAAAAGGGTATAAATATAAAATTCAAGTAAGCCC GCTTGATTGTACAGGTTGCGAACTTTGCGCACAAAATTGTCCAAGCAAGGAAAAATCTCTTGTAATGGTTCCGCTTGAAG AAGAAATTGACAATAAAGAACAAGAAAATGCCGATTATTTGTTTCAAAATGTTACTTACAAATCGGATCTTACAGGAAAA GAGAGTGTAAAAGGTATCGGTTTTGCAAAACCTTATTTTGAATTTCACGGTGCGTGTCCTGGATGCGGCGAAACACCTTA TATCACAGCAGTTTCAAGATTATTCGGTGACCATATGATTGTAGCAAATGCGACAGGTTGCAGCTCGATTTACGGCGGCT CTGCACCTTCTATGCCTTATACGCATGACGAAAACGACAGAGGTATCGCTTGGGCAAACTCACTTTTTGAAGATAATGCC GAATTTGGTTTTGGTATGAGAGTGGCGAGCGAGACATTAAGACACCAAATAGAAAATATAATGCTTGAAACAAAAAAAGA TGTTCCAAACGCACTTAGCGCACTTTATACAGACTGGATAGAAAACCGCAACGACAGCCTTAAATCAGCCGAAATTCGTG ATCGCTTAATTCCTTTGCTTGAAGCGAATAAAAAAGAAAAAGGCGTAGCTGAAATTTTAGGTTTGAAACAATATCTATCT AAAAAATCTCAATGGATTATAGGCGGTGACGGCTGGGCTTATGATATCGGTTATGGCGGACTTGATCACGTTTTGGCAAG CGGCGAAAACATAAATGTGCTTGTTCTTGATACAGAAGTTTATTCAAACACAGGCGGACAAAGTTCAAAAGCAAGCCGCA CAGGTTCAATAGCACAATTTACAGCAAGTGGAAAATCCGTCCAAAAGAAAGATTTAGGACAAATTGCGATGACTTACGGC AACATTTTTGTAGCTCAAATCAACTCAAACGCAAGTCAGGCAAATATGATAAAAGCCATCCTGGCAGCCGAAGCATACGA CGGACCTAGCCTTATTATTTGTTACGCGCCTTGTATTTCGCATGGTATAAAAGGCGGTTTGGCTAAATCAGGAAATCAAG CCGAACTTGCAACAAAATGCGGATATTGGCCGACTTATATATTTAATCCTGAACTCTTAAAAAGCGGACAAAATCCTTTG AAAATAACTTCGAAAGAGCCGGATTGGGAACTTTATGATGAATTTTTGTCAAATGAAGTTCGCTACAATGCGCTTAAGAA ATTTAATCCTGATCACGCAAGTGAGCTTTTAGAACAAAACAAAAAAGATTCTCAAAGAAGATATCGCCAACTGGTTAGAT TTTCAAAATCAGATTTCAGCGATGAAATTTAG Protein sequence : MSKIMKTMDGNEAAAYVSYAFTEVAGIYPITPSSPMADYTDVWASRGKKNLFGMPVKVVEMQSEGGAAGTVHGSLQAGAL TTTYTAAQGLLLKIPNMYKIAGQMLPGVIHVAARSLAAQALSIFGDHQDVYACRQTGFAMLSSASVQEVMDIGGIAHLAA IKGRVPFLHFFDGFRTSHEIQKIEVMDYADFDKLLDRKAVQAFRDNALNSEHPKTRGTAQNDDIYFQTRELSNKYYEAVP DIVADYMAEISKITGRDYKPFNYYGAKDATNIIVAMGSVNEALEEVVDYLTSKGEKVGVIKVHLYRPFSLKYFFDVLPKS VERIAVLDRTKEPGSIGEPLYLDIKSAFYGNKKEPLIIGGRYGLSSKDVDPAQLIAVFENLKSKEPKNRFTVGIDDDVTF TSLKVGKKISLGDQDAIECLFYGLGADGTVGANKNSIKIIGDKTDLYAQAYFAYDSKKSGGYTRSHLRFGKKPIRSTYLV SNPHFVACSVAAYLDVYDVVDGIREGGTFLLNSIWDAKETIEKIPNKVKRILAERKAKFYILNATKLASEIGLGNRTNTI MQSAFFKLANIIPFDDAKAYMKEYAKKTYGKKGDKIVQMNYDAIDRGADGLIEIKVDPAWINLKDETTNEHDKYKGDKFI ESVVKPINAARGDKLPVSAFLGHEDGSFEAGTTKYEKRGVGVMVPKWIKENCIQCNQCVFVCPHAVIRAFLLDEKDEQNS PESLKPNLIDAKGKDVKGYKYKIQVSPLDCTGCELCAQNCPSKEKSLVMVPLEEEIDNKEQENADYLFQNVTYKSDLTGK ESVKGIGFAKPYFEFHGACPGCGETPYITAVSRLFGDHMIVANATGCSSIYGGSAPSMPYTHDENDRGIAWANSLFEDNA EFGFGMRVASETLRHQIENIMLETKKDVPNALSALYTDWIENRNDSLKSAEIRDRLIPLLEANKKEKGVAEILGLKQYLS KKSQWIIGGDGWAYDIGYGGLDHVLASGENINVLVLDTEVYSNTGGQSSKASRTGSIAQFTASGKSVQKKDLGQIAMTYG NIFVAQINSNASQANMIKAILAAEAYDGPSLIICYAPCISHGIKGGLAKSGNQAELATKCGYWPTYIFNPELLKSGQNPL KITSKEPDWELYDEFLSNEVRYNALKKFNPDHASELLEQNKKDSQRRYRQLVRFSKSDFSDEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 74 |
