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Name : CHAB381_1497 (CHAB381_1497) Accession : YP_001407032.1 Strain : Campylobacter hominis ATCC BAA-381 Genome accession: NC_009714 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] (ssdh) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1433716 - 1435149 bp Length : 1434 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : ATGGAAAATTTCAGAGATTTCTTAAAGCACGCGGACATAAAATTTAAAGAATGCAAAAATCATTTCGCAGTCAAAAATCC AGCAAATGGTGAAATTTTAGCTTTTATAAAAAAGACAAATGCAAATGAAATTTCACAAATTTTAACCGGGATGCAAAAAG CGCAAAAGGAGTGGGCAAACTTAAACGCGCTCCAACGAAGCGATATAATGCTAAAATGGCACGAAAAAATAGTGCAAAAC CGCGAAATGCTTGCCGAAATTATGACACTTGAGCAAGGCAAGGCTATAAAAGAAGCGCGCGGCGAAATTGATTATGCGGC AAGTTTTGTAAGATGGTTCGCAGAAGAGTGCCGAAGAATAGACGGCGACATTCTAACGCCTTTGAAACAAACACAAAAAC TCTTTGTAATCAACCAACCGATCGGCGTTTGCGCCGCCATTACTCCTTGGAATTTTCCAAGCTCAATGATAACAAGAAAA GCAGCTCCTGCACTTGCTTGCGGATGTGCGATGATAGTAAAATCAGCAAGCGCTACACCGCTTAGCGCTTATGCTTTACA AATTTTGGCACAAAAAGCAGGAATTCCAAACGATGTTTTTATAATAGTAAATGGCGACGCAAGCGAAATTTCAGACGCAT TTTGCAAAAGCGATACTGTGCGAAAAATCACTTTTACCGGTTCAACCGAAGTTGGAAGCAAAATTTATGAAAAATCAGCA AAAACAATCAAAAAAATCTCGCTTGAGCTTGGCGGAAATGCGCCTGTGATTGTATTTGATGACGCCAATTTACAAAAAGC GGTTGATGGCGTAATTGCCAGCAAATTTAGAAACTCAGGTCAAACTTGCGTTTGCGCAAACCGCGTATATGTGCAAAGCG GTATATACGATGCACTTTGCGAAAAACTCGTAAAAAAAGTAAAAGAGATGAAAATCGGCGAGGGTATAAAAGAAGACACT GACTTCGGACCGTTGATAAATGAAAGCGCAGTAGAAAAAGTGGAAGAACTTATAAAAGATGCGTTAAATAAAGGCGCTAA ATGCCTGCTTGGTGGAAAAAGAAGCACACTTGGCGGAACATTTTTTGAGCCGACTATTCTAAACGGCGCCACAAGTAAAA TGAAATTTGCCAAAGAAGAAATTTTCGGTCCTCTTTGCCCTATTTTTAAATTTGAAAATATAGACGATGTTATAAATCAG GCAAACGACACAAAATACGGTCTTGCAAGCTACATTTTCACTGAAAATTTAAACACAATCACAAAAGTAAGTGAAGCGCT TGAATACGGAATGGTCGGTGTAAATACAGGATTAATCAGCAATGAAGTGGCACCATTTGGCGGCGTAAAAATGAGCGGAC TTGGACGAGAAGGCAGTAAATACGGCATTGCAGAATATATGCAAAAAAAATATATCTGTGTAGATATAAAATGA Protein sequence : MENFRDFLKHADIKFKECKNHFAVKNPANGEILAFIKKTNANEISQILTGMQKAQKEWANLNALQRSDIMLKWHEKIVQN REMLAEIMTLEQGKAIKEARGEIDYAASFVRWFAEECRRIDGDILTPLKQTQKLFVINQPIGVCAAITPWNFPSSMITRK AAPALACGCAMIVKSASATPLSAYALQILAQKAGIPNDVFIIVNGDASEISDAFCKSDTVRKITFTGSTEVGSKIYEKSA KTIKKISLELGGNAPVIVFDDANLQKAVDGVIASKFRNSGQTCVCANRVYVQSGIYDALCEKLVKKVKEMKIGEGIKEDT DFGPLINESAVEKVEELIKDALNKGAKCLLGGKRSTLGGTFFEPTILNGATSKMKFAKEEIFGPLCPIFKFENIDDVINQ ANDTKYGLASYIFTENLNTITKVSEALEYGMVGVNTGLISNEVAPFGGVKMSGLGREGSKYGIAEYMQKKYICVDIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-117 | 52 |
