Gene Information

Name : Mboo_0008 (Mboo_0008)
Accession : YP_001403175.1
Strain : Methanoregula boonei 6A8
Genome accession: NC_009712
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 6134 - 7030 bp
Length : 897 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAAGCTTGAAGAACTGAGATTTGGCACTGAGCTGCTCAAACGCGGCTTTGCATCCATGCAGAAAGGGGGCGTGATCAT
GGATGTCGTCAATGCCGAGCAGGCAAAGATTGCCGAGGCAGCCGGGGCCGTCGCAGTCATGTCGCTTGAGCGGGTGCCGT
CCGATATCAGGAAAGCGGGCGGTGTCGCACGGATGGCAGACCCCGAGAAGGTCACTGAGATCATTGAAGCAGTTTCGATC
CCGGTTATGGGTAAAGTCAGGATCGGCCACTTTGTCGAGGCACAGGTGCTCGAGGTGCTTGGCGTCGACATGATCGATGA
GAGCGAAGTCCTCACTCCCGCAGACGAGGAATACCATATCGATAAGAAACAGTTCAAGGTCCCGTTTGTCTGCGGGGCAC
GGAACCTGGGCGAGGCACTGCGCCGGGTAAATGAGGGGGCAGCGATGATCCGCACGAAGGGCGAGGCCGGGACCGGAAAT
GTCGTCGAGGCCGTGCGCCACATGCGGGCGATCACGGGAGAGATCCGGAAGATCCAGGGAATGGACGATCAGGAGCGGAT
CGCCTATGCACGGAGCATCGAGGCCCCGGCGGAGCTTGTTGTTGAGAGCGCAAAGCGAGGCCGGCTCCCAGTGGTCAACT
TCTCTGCCGGAGGCATTGCCACCCCCTCGGACGCTGCCCTGATGATGCAGCTTGGTGCTGATGGAGTCTTTGTCGGATCG
GGGATCTTTAAATCCTCGAACCCCGAGAAGATGGCAAAAGCGATCGTGGAAGCGGTCAACCACTACAACGATCCCACCGT
TATCGCCAGAATCAGCAAGGGCCTTGGCGATGCGATGCCCGGCCTTGATGTCCATACGCTCAGGCCCGATGAGGTGTTGC
AGACCCGTGGGCGATAA

Protein sequence :
MKLEELRFGTELLKRGFASMQKGGVIMDVVNAEQAKIAEAAGAVAVMSLERVPSDIRKAGGVARMADPEKVTEIIEAVSI
PVMGKVRIGHFVEAQVLEVLGVDMIDESEVLTPADEEYHIDKKQFKVPFVCGARNLGEALRRVNEGAAMIRTKGEAGTGN
VVEAVRHMRAITGEIRKIQGMDDQERIAYARSIEAPAELVVESAKRGRLPVVNFSAGGIATPSDAALMMQLGADGVFVGS
GIFKSSNPEKMAKAIVEAVNHYNDPTVIARISKGLGDAMPGLDVHTLRPDEVLQTRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-80 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 64