Gene Information

Name : YpsIP31758_0759 (YpsIP31758_0759)
Accession : YP_001399745.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : GTPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 918013 - 918888 bp
Length : 876 bp
Strand : -
Note : identified by match to protein family HMM PF01926

DNA sequence :
ATGAAAAAATCAGAAGGTCTGCAAGCCATCGAAAAACCGCTGGCGTCACTCCCCCATGCCATCAGCAAACATATTCTTGA
CCATATTCAAACGCTCACTCACTACGAACCCGTCATCGGCATCATGGGTAAAACCGGATCGGGTAAGTCGTCGCTGTGTA
ACGCTTTGTTCCAGAGCGAGGTCACGCCCGTCAGTGATGTCAACGCCTGCACCCGTGACACGCTGCGATTGCGGCTGAGC
AGTGGTGTCCATAGCCTGATACTGGTGGATCTGCCCGGCGTGGGTGAGAGTGAGCAACGGGATAGCGAATATGAATCTCT
GTATCGCAATATCCTCCCTGAGCTGGATCTCATTCTGTGGGTCATCAAAGCCGACGATCGGGCGTTCTCCGTAGATGAAC
GTTTCTACCGTCGAGTGATGGCGGGATACCAACAACGGGTACTGTTTGTCGTCAACCAGGCTGACAAAATCGAACCCTGC
CATGAATGGAACGCCATCAGCAATACACCATCACCGCACCAGTTGGTGAATATTGAAGCAAGGCTAGAATCCATTCGCCA
GCTATTTTCATCGCATCATCCGGTATGTATCGTCTCAGCCAGGACTGAATGGAATCTGTCGTCAATGGTCGACACGATGA
TGCGCTGCCTGCCTGACCGTGCCGCCAGCCCACTGGCAACTCAGTTGCACAGGAGGCTATGCAGTGAACCGGTAAAAAAG
CAGGCGCGTGAGCGCTTTGGTGATGCGGTGGGAGAGGTCTTTGATTCAGCTGGATCGGCGTCATTCATTCCCGCACCACT
CAAAACGGTCATTCGAACAATCCGCGATACTGTGGTATCCGTTGCCCGCGCAGTATGGGACTGGATTTTCTTCTAA

Protein sequence :
MKKSEGLQAIEKPLASLPHAISKHILDHIQTLTHYEPVIGIMGKTGSGKSSLCNALFQSEVTPVSDVNACTRDTLRLRLS
SGVHSLILVDLPGVGESEQRDSEYESLYRNILPELDLILWVIKADDRAFSVDERFYRRVMAGYQQRVLFVVNQADKIEPC
HEWNAISNTPSPHQLVNIEARLESIRQLFSSHHPVCIVSARTEWNLSSMVDTMMRCLPDRAASPLATQLHRRLCSEPVKK
QARERFGDAVGEVFDSAGSASFIPAPLKTVIRTIRDTVVSVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 1e-84 60
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-84 60
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 2e-83 60
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 1e-83 60
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 5e-84 60
unnamed AAL99256.1 unknown Not tested LEE Protein 7e-84 60
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 4e-84 60
Z1210 NP_286745.1 histone Not tested TAI Protein 3e-84 60
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 3e-84 60
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 3e-84 60
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 3e-84 60
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 5e-84 60
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-83 59
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 4e-55 42
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 2e-54 41
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-54 41
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-54 41
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-53 41
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0759 YP_001399745.1 GTPase VFG1062 Protein 6e-85 60
YpsIP31758_0759 YP_001399745.1 GTPase VFG1674 Protein 8e-85 60
YpsIP31758_0759 YP_001399745.1 GTPase VFG0654 Protein 7e-84 60
YpsIP31758_0759 YP_001399745.1 GTPase VFG1612 Protein 2e-55 42
YpsIP31758_0759 YP_001399745.1 GTPase VFG1522 Protein 1e-53 41