Gene Information

Name : YpsIP31758_0754 (YpsIP31758_0754)
Accession : YP_001399740.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 914325 - 915146 bp
Length : 822 bp
Strand : -
Note : identified by similarity to GB:AAB08671.1; match to protein family HMM PF06067

DNA sequence :
ATGACCCGTTTAGCCTCCCGTTTTGGCCGGGTGAACTCTGTTCGCCGCGACCGCCCTCTGACCCATGATGAACTGGCCTA
CTATGTCCCCAGCGTCTTTGGCGAAGACAAACATGTCTCCCGCAGTGCCCGATACACGTATATTCCCACTATTACCTTAT
TGGATAAATTGCGCGAAGAAGGGTTTGTGCCGTTCTTTGCCTGCCAGACCCGGGTACGGGACCCCGAGAAACGTGATTAC
ACTAAACATATGCTGCGCTTGCGGCGCGTCACTCAGATAGCCGGTCAACAAGTGCCTGAAATTATTATGTTGAACAGCCA
CGATGGCAGCAGTAGCCACCAATTAATCCCCGGCATGTTTCGTGCAGTCTGTGCGAATGGTTTAATCTGTGGTGAGTCTT
TTGGCGATATTCGTGTGCCACACTTGGGCGATATAGTGGATAAAGTGATTGAAGGCGCGTATGAGGTACTGGGGATTTTT
GACCGGGTAGAACAACAACGTGAAGGCATGCAGGCCCTGACTCTGCCCACGGCAGCGCAGCATGCACTGGCCCATGCTGC
ACTGACCTACCGTTACGGTGAGGAGCACCATCCCGTCACGGAGTCCCAAATCCTGATGCCTCGACGTTGGGAAGATAAAA
AAGATGACTTGTGGACAACGTTTCAAAGGCTGCAAGAAAATCTGAGCAAAGGGGGATTATCGGGTCGCAGCGCCACAGGC
AAGCGGGCACAAACCCGCGCAGTGAATGGGATTGATGGCGATATCAAGCTGAACCGCGCATTGTGGGTGATGGCTGAGCG
ATTAAAGCAGGTCATGAGTTGA

Protein sequence :
MTRLASRFGRVNSVRRDRPLTHDELAYYVPSVFGEDKHVSRSARYTYIPTITLLDKLREEGFVPFFACQTRVRDPEKRDY
TKHMLRLRRVTQIAGQQVPEIIMLNSHDGSSSHQLIPGMFRAVCANGLICGESFGDIRVPHLGDIVDKVIEGAYEVLGIF
DRVEQQREGMQALTLPTAAQHALAHAALTYRYGEEHHPVTESQILMPRRWEDKKDDLWTTFQRLQENLSKGGLSGRSATG
KRAQTRAVNGIDGDIKLNRALWVMAERLKQVMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-87 68
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-89 68
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-83 68
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-83 68
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-83 68
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 6e-86 68
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 6e-86 68
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 6e-86 68
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 6e-86 68
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-87 68
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-87 67
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-88 67
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-84 67
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-84 66
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-84 66
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-74 54
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0754 YP_001399740.1 hypothetical protein VFG1526 Protein 2e-89 68
YpsIP31758_0754 YP_001399740.1 hypothetical protein VFG1676 Protein 3e-84 67
YpsIP31758_0754 YP_001399740.1 hypothetical protein VFG1615 Protein 7e-88 67
YpsIP31758_0754 YP_001399740.1 hypothetical protein VFG0658 Protein 1e-84 66