Gene Information

Name : YpsIP31758_0752 (YpsIP31758_0752)
Accession : YP_001399738.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : antirestriction ArdB family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 913506 - 913937 bp
Length : 432 bp
Strand : -
Note : identified by match to protein family HMM PF03230

DNA sequence :
ATGAACAGCCCCCTCAATACCGAAACAAACGCACTCACCGCCACCCGGGTTTCTGATGCGCAACGCATCCATTTCTGGCC
AAAATACTTTGGTCAGGTACCCAAATGGGCGTTGATTGAACCACAGGTTTTTCGTTGGCTGGACCGGTTGTGTGACGACT
ACCACGGCGACTTTTGGGACTTCTACACCTTGCCCAACGGCGGGGCATTTATGGTGCCGGGCACGGAGCAAGACTATGTG
TTGTTTAACGCGCTCAATGGCAACGGGGCCACCGTCAGTCGTGAAGCTGCGGGTATTACCGCCTGCCTGATGGCTTACAG
TCACCATGCCTGCCGTACTGAAAATGAGTTTATGACTGAACACTTTTACAGATTGCGCGAATATGCCTTACAACATCCTG
AAAGTCGCGCCATTTTTGACTTGATTGACTGA

Protein sequence :
MNSPLNTETNALTATRVSDAQRIHFWPKYFGQVPKWALIEPQVFRWLDRLCDDYHGDFWDFYTLPNGGAFMVPGTEQDYV
LFNALNGNGATVSREAAGITACLMAYSHHACRTENEFMTEHFYRLREYALQHPESRAIFDLID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 9e-37 60
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 9e-37 60
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 8e-37 59
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 2e-39 58
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-37 58
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-36 58
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-36 58
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-36 58
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-36 57
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 57
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 2e-38 57
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 4e-37 57
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 4e-37 57
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-37 57
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-38 57
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 5e-37 56
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 1e-38 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0752 YP_001399738.1 antirestriction ArdB family protein VFG0659 Protein 3e-37 60
YpsIP31758_0752 YP_001399738.1 antirestriction ArdB family protein VFG1677 Protein 1e-39 58
YpsIP31758_0752 YP_001399738.1 antirestriction ArdB family protein VFG1616 Protein 1e-39 57
YpsIP31758_0752 YP_001399738.1 antirestriction ArdB family protein VFG1527 Protein 5e-39 57