Gene Information

Name : YpsIP31758_0748 (YpsIP31758_0748)
Accession : YP_001399734.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 912263 - 912619 bp
Length : 357 bp
Strand : -
Note : identified by match to protein family HMM PF06755

DNA sequence :
ATGAAACCACGCGCCACAGCGCAGGGTGCATTGCCCGTGCCTGTTATTTATCAGCAACTGCTCGCTTTTCTGCTGGAGCA
CCACTATGGCCTGAGCCTCAACGATACGCCCTATCACGATGAACAGGTGATTGCACAGCAGATAGAACAAGGGATTTCAG
TGGGCGATACCATTAATGCATTGGTTGATAAATATGCATTAGTGCGAATTGGTCGTAACGGGTTCAGCGCACTGGTACAA
GACCCGATGCTGAGTAAGGGTGATATCGCCCGTGCTCGCCAGGCCGCAGGTCTGTGGCGTGCGCATTTTCCGCCAACGTT
GCTGTACCCAACCGAGTCCCTCAATCCTATTCCATAG

Protein sequence :
MKPRATAQGALPVPVIYQQLLAFLLEHHYGLSLNDTPYHDEQVIAQQIEQGISVGDTINALVDKYALVRIGRNGFSALVQ
DPMLSKGDIARARQAAGLWRAHFPPTLLYPTESLNPIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-18 57
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 5e-18 56
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 7e-18 56
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 5e-18 56
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 7e-18 56
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 3e-18 53
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 1e-18 53
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 1e-18 53
unnamed AAL57575.1 unknown Not tested LEE Protein 2e-19 53
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-18 53
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 5e-18 53
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 8e-18 52
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 8e-18 52
unnamed AAL08478.1 unknown Not tested SRL Protein 1e-17 52
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 2e-17 52
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 1e-17 52
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-17 52
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 4e-18 51
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 4e-18 51
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-18 51
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-18 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG0663 Protein 2e-18 56
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG1530 Protein 1e-18 53
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG1620 Protein 4e-19 53
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG1682 Protein 2e-18 53
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG1069 Protein 4e-18 52
YpsIP31758_0748 YP_001399734.1 hypothetical protein VFG0786 Protein 1e-18 51