Gene Information

Name : YpsIP31758_0740 (YpsIP31758_0740)
Accession : YP_001399727.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : IS1 family transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 907446 - 907721 bp
Length : 276 bp
Strand : +
Note : identified by match to protein family HMM PF03811

DNA sequence : 
ATGGCTAAGGTTGATGTGAAATGTCCATTTTGCGAGCAGTTCCACCCTGTTAAAAAGCACGGGCCAGGACGCACAGGGCA
TCAGCGCTACCGCTGTCAGGCCTGCCGACGGAGCTTTCAACTAGAGTACGAGTATCGTGCCTGCCACCCCGGTATGAAAG
AGCAAATTGTCGATCTTGCTATGAACAATGCCGGTATTCGTGATACTGCACGGGCGTTGCATATCAGTATCAATGCGGTC
ATGCGCACTTTAAAAAACTCTCGCCGCAGCGTGTAA

Protein sequence : 
MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHPGMKEQIVDLAMNNAGIRDTARALHISINAV
MRTLKNSRRSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 3e-08 47
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 3e-08 47
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 2e-17 45
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 2e-17 45
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 2e-17 45
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 2e-17 45
insA AEZ06026.1 InsA Not tested AbaR24 Protein 2e-17 45
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 2e-17 45
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 3e-18 44
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 5e-18 44
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 5e-18 44
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 9e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0740 YP_001399727.1 IS1 family transposase orfA VFG1690 Protein 1e-08 47