Gene Information

Name : YpsIP31758_0724 (YpsIP31758_0724)
Accession : YP_001399713.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : IS1, transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 885448 - 885711 bp
Length : 264 bp
Strand : +
Note : identified by match to protein family HMM PF03811

DNA sequence : 
ATGGCTTGCATTAATGTTCATTGTCCCCGTTGTGATTCTGCTTTGGTTTGTCGACATGGTCAGAACCCTAAGGGCCAAAG
CCGTTTCCGCTGCCGTGAGTGCCGCTCTGTATTCCAACTGACCTACACTTATCAGGCCAGAAAGCCCGGAGTTAAAGGGC
AGATCGTTGATATGGCCTTTAACGGCGCAGGTGTGTGGGATATGGCAAGAACGCTAAAAATCGGTATCAATACCGTTATC
CGCACTTTAAAAAACTCTTGCTGA

Protein sequence : 
MACINVHCPRCDSALVCRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPGVKGQIVDMAFNGAGVWDMARTLKIGINTVI
RTLKNSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 7e-15 59
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 6e-15 59
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 7e-14 45
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 7e-14 45
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 1e-13 44
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 1e-13 44
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 2e-13 43
insA AEZ06026.1 InsA Not tested AbaR24 Protein 2e-13 43
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 2e-13 43
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 2e-13 43
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 2e-13 43
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 2e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_0724 YP_001399713.1 IS1, transposase orfA VFG1690 Protein 3e-15 59