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Name : YpsIP31758_0715 (YpsIP31758_0715) Accession : YP_001399704.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : major facilitator transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 876682 - 877905 bp Length : 1224 bp Strand : + Note : identified by match to protein family HMM PF07690 DNA sequence : ATGCGCATATCCTCAGAGTCTGACGCTCGCTCAAGCGGGCTTACATCGTCTACCCATTGGCCTTTAGCGTTCTGCGTTGG GTTACTGGGCATCGGGCAAAACGGTTTATTAGTGGTGTTACCGGTATTGGTAAGCCGCACTCATCTGTCATTGTCGGTGT GGGCGGGTCTATTGACACTTGGCTCAATGCTATTTTTAGTGGGATCGGCATGGTGGGGCCGGCAATCGGAGATCCGTGGC TGCAAATTTGTTGTCATCATGGCACTGGCAGGTTACTTGCTTAGCTTTGTTTTATTGGCGCTGGCGGTGTGGGGGTTGTC AGCAGGGTGGTTATCGGAAATGGCCGGTCTGGGCTGGCTAATCGTGGCTCGTATTATTTATGGCCTGACCGTCTCTGGTA TGGTGCCCGCTAGCCAGACCTGGGCACTACAGCGTGCCGGTTATGAGCAACGGATGGCGGCGCTGGCGACCATCAGTTCG GGGCTGAGCTGTGGCCGTCTGCTCGGCCCATTGTGTGCCGCCCTCGCGCTCTCAATACACCCGATAGCCCCCCTGTGGCT GATGGCAATTACACCACTGATCGCACTGCTGGTGGTGTATCGCCAATACAATGACCCGCCGTTACCCCCAGTGGTGCATC AACAAAATCGTTTACGCCTCAATATGTTGCCTTATTTACTGTGCGCGTTGTTGCTGGCAGCAACTGTCAGCCTGATGCAA CTTGGCCTGGCACCTCACCTAAGTCAATTGTTTAGCCATTCGGCCACCACGGTGAGCCACCACGTGGCCATTTTGCTTAG CATAGCCGCGGGTTGTACGTTGCTGGCACAGTTTCTGGTGGTTCGCCCACAACGTTTTACGCCACCTCAGTTGCTGCTAG TGGCAGCCTTGCTCATGGTGCTTGGCTTGGGGCTGATGTGTGTTCAACCGCTGGTACTATTCTATCTAGGTTGTGCGCTG GCTTCTTTCGGCGCCGCGATGGCGACACCGGGTTACCAACTGATGTTGAATGACCGGTTATCTACTGGCAAAGGCTCCGG CGTGATCGCTACCAGCCATACATTGGGCTATGGCATGAGTGCATTGATGGTGCCGGTAGTCGCAAAATTTTATGGTGAGT CACAGTTGGTAGCCGCGGCGTTCATGATGGCCATTTTGTTGGGGGGGATCAGTGGCTGGCTGTGGTGCCAGCATCGAACA ACCGCCCATTCTGTGGGAGAGTAA Protein sequence : MRISSESDARSSGLTSSTHWPLAFCVGLLGIGQNGLLVVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRG CKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGLGWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISS GLSCGRLLGPLCAALALSIHPIAPLWLMAITPLIALLVVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQ LGLAPHLSQLFSHSATTVSHHVAILLSIAAGCTLLAQFLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCAL ASFGAAMATPGYQLMLNDRLSTGKGSGVIATSHTLGYGMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQHRT TAHSVGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 3e-66 | 59 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 5e-66 | 59 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 5e-66 | 59 |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 9e-66 | 59 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 2e-65 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YpsIP31758_0715 | YP_001399704.1 | major facilitator transporter | VFG0614 | Protein | 2e-66 | 59 |
