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Name : fliP (YpsIP31758_0626) Accession : YP_001399618.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 737329 - 738099 bp Length : 771 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGCCGCAGCCTTCGAGCGATAACACCGGTAGCTATCATCAGCCGCGGCCTGCTGGTGGGCGGGCTGCTGTATTCCCC TCTTCTGCTGGCGCAGGAGGGGGGGATCACCCTGTTCAATACCGTACAAACCGCAACGGGCCAAGATTACAACGTTAAGA TTGAAATCCTGATCCTGATGACCCTGCTCGGTTTGTTGCCGATTATGATGCTGATGATGACCTGCTTTACCCGCTTCATT ATTGTGCTGGCGATATTGCGTCAGGCGCTGGGGTTGCAGCAAAGCCCGCCGAATAAAGTCCTGACCGGTATCGCCCTCGC CCTGACCTTGCTGGTTATGCGCCCGGTGTGGACCAAAATTCATCAGGATGCGGTCATCCCTTTCCAACAGGATGAAATTA CGCTTTCGCAAGCACTGGGCCGAGCAGAAGTGCCGTTGAAGAACTATATGCTCGCGCAGACCAGTACTAAATCACTGGAT CAAATGATGGCTATCGCCCAAGTCAGTGGCGAGCCACAACAGCAGGATTTAAGCGTGGTCACCCCCGCTTATGTGCTCAG TGAGCTGAAAACCGCCTTCCAGATAGGCTTTATGATTTATATCCCTTTTCTGGTGATTGACCTGATTGTGGCCAGTATTT TGATGGCGATGGGGATGATGATGCTATCGCCCTTAATTGTCTCATTACCGTTTAAATTAATGCTGTTTGTCTTGTGTGAT GGCTGGACATTAATGGTTGGTACACTCACTGCCAGCGTTCAGGGGCTATAG Protein sequence : MSRSLRAITPVAIISRGLLVGGLLYSPLLLAQEGGITLFNTVQTATGQDYNVKIEILILMTLLGLLPIMMLMMTCFTRFI IVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAVIPFQQDEITLSQALGRAEVPLKNYMLAQTSTKSLD QMMAIAQVSGEPQQQDLSVVTPAYVLSELKTAFQIGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCD GWTLMVGTLTASVQGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 7e-30 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 7e-30 | 43 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 7e-30 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 5e-30 | 43 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 3e-31 | 42 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 1e-23 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-22 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 6e-22 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 9e-24 | 41 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 6e-25 | 41 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 6e-25 | 41 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 7e-27 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 3e-22 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 7e-53 | 56 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 7e-44 | 54 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 8e-47 | 53 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 5e-44 | 53 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 5e-29 | 44 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG0551 | Protein | 3e-25 | 41 |
| fliP | YP_001399618.1 | flagellar biosynthesis protein FliP | VFG1773 | Protein | 7e-28 | 41 |
