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Name : papD (YpsIP31758_0615) Accession : YP_001399607.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : chaperone protein PapD Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 727206 - 727925 bp Length : 720 bp Strand : + Note : identified by similarity to SP:P15319; match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGAAGAAGCTTTCATTAATCGCATTGACCAGCACATTGGTATTCACCAGTTATGCCGCCAATGCCGCGATTGCATTAGA TCGGACGCGAATTATTTATAACGGGCAGGATAAGTCCATCAGCCTGAATATCAGCAATGAAAATAAGACACTGCCTTATT TAGCACAGGCATGGATTGAGAATGAACAACAGCAAAAAGTCACCACCCCGTTAGTGGCAACGCCGCCGGTTCAACGGGTG GAAGCGGGTAAGAAAAGCGCGGTACGTATCTCTGCCACCCCTGAGGCGCTGAAATTGCCACAAGATCGCGAGTCACTGTT CTACTTCAATCTGCGTGAAATTCCGCCTCGCAGTGAAAAATCCAATGTCATGCAGATTGCCTTACAAACCAAAATCAAAC TGTTCTACCGACCAGAAGGGATTACCCCTGCCCCGGGCCAAATTTGGCAGGAACAACTGGTTCTGCATAAAACGGCGCAA GGTTTTCGGCTAGAGAACCCCACTCCCTATTACATTACGGTCGTTGGGCTGGCGGAGAAAGGTAAGTCATCGGCTGACAG CAATTTTCAACCTTTGATGGTTGCGCCCAAATCCAGTGCTGAGCTGAAATCTGCCAGTTTCACCGCCCCCGTCCTGACCT ACATTAATGATTATGGTGGTCGACCAGAACTGAGTTTCAGTTGCAGTGGCAGCATTTGCCGGGCAGCTAAAACGATTTAA Protein sequence : MKKLSLIALTSTLVFTSYAANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQAWIENEQQQKVTTPLVATPPVQRV EAGKKSAVRISATPEALKLPQDRESLFYFNLREIPPRSEKSNVMQIALQTKIKLFYRPEGITPAPGQIWQEQLVLHKTAQ GFRLENPTPYYITVVGLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSICRAAKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-66 | 63 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 4e-74 | 62 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 8e-75 | 60 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-74 | 59 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-74 | 59 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-74 | 59 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-74 | 59 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 7e-75 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papD | YP_001399607.1 | chaperone protein PapD | VFG0885 | Protein | 7e-67 | 63 |
| papD | YP_001399607.1 | chaperone protein PapD | VFG1547 | Protein | 5e-75 | 60 |
| papD | YP_001399607.1 | chaperone protein PapD | VFG0896 | Protein | 6e-75 | 59 |
