Gene Information

Name : rph (YpsIP31758_0056)
Accession : YP_001399057.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 63985 - 64701 bp
Length : 717 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAGCAGACCGAGCAGCTCAACAAGTTCGCCCACTGACTTTGACCCGTAATTACACGAAACACGCTGAAGGTTC
AGTGTTGGTTGAATTCGGCGATACCAAAGTATTGTGTACCGCCACAGTTGAAGAAGGTGTTCCACGCTTTCTGAAAGGCC
AGGGCCAAGGGTGGATAACGGCAGAATATGGCATGTTGCCTCGTTCGACCCATAGCCGTAATGCGCGCGAAGCCGCAAAA
GGTAAACAAGGTGGGCGTACTCTTGAAATCCAACGTCTGATCGCCCGTTCTTTACGTGCAGCGGTCGATTTGAAAAAGTT
GGGTGAATTTACCATCACCTTAGACTGCGATGTATTGCAAGCGGATGGTGGCACCCGTACCGCCTCAATCAGTGGTGCTT
GTGTAGCATTGGCTGACGCGCTGAACAAACTGGTTGCTAGTGGTAAATTGAAAGCTAACCCGATGAAGGGCCTGGTTGCT
GCTGTGTCTGTCGGGATCGTTAAAGGCGAGGCTCTTTGCGATCTGGAATACGTAGAAGATTCTGCGGCAGAAACAGATAT
GAATGTGGTGATGATGGAAGATGGCCGGATGATTGAGGTGCAAGGCACCGCTGAAGGTGAGCCGTTCAGTCACGAAGAAT
TATTGGCGTTGCTGGATCTGGCCCGCGGAGGGATAGAAACCATCTTCCAGGCGCAGAAGGCGGCATTGGAATCATAA

Protein sequence :
MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWITAEYGMLPRSTHSRNAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKKLGEFTITLDCDVLQADGGTRTASISGACVALADALNKLVASGKLKANPMKGLVA
AVSVGIVKGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLALLDLARGGIETIFQAQKAALES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-61 57