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Name : treC (YpsIP31758_0430) Accession : YP_001399423.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 507000 - 508667 bp Length : 1668 bp Strand : - Note : a.k.a trehalose-6-phosphate hydrolase - DMH; identified by similarity to SP:P28904; match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : ATGAATAATCCAATCCCTTGGTGGCAACATGGTGTCATCTATCAGATTTACCCGAAGAGCTTTCAGGACAGTACCGGTAA TGGCTATGGTGACCTGGCAGGCGTTGCGCAGCGGCTGGATTATCTGCAAAAGCTGGGCGTTGATGCCATTTGGCTGACAC CGGTGTATGTCTCGCCACAAGTGGATAACGGTTATGACGTGGCGGATTACTGCGCCATTGACCCCGCTTATGGCACATTG GATGACTTTAAACGTTTGGTCGCGGGTGCTCATCAGCGAGGCATACGCATCATCATGGATATGGTGTTCAATCACACCTC CACAGAACATGCCTGGTTTAAAGCTTCGCAGGATCGTAATAGCCCTTATCGGCAATTTTATATTTGGCGTGACGGTGACG GTGGAGACGGCAGTTTACCGAATAACTGGCGCTCGAAATTCGGTGGTCACGCATGGCAGTGGCACGCGGCCAGCGGCCAG TATTATCTGCATTTGTTTGCCCCAGAGCAGGCTGATCTGAATTGGGAACACCAACCGGTACGCGATGAGCTCAAAAAGGT GTGTGAATTTTGGGCCGATCTGGGGGTTGATGGTCTGCGTTTGGATGTCATCAATCTGGTGTCCAAACAGCAGGATTTCC CTAATGATCTGGACGGCGATGGCCGCCGTTTTTATACCGATGGCCCACGCATTCATGAGTTTTTGCAGGAACTGAGCCGC GATGTGTTCCAGCCACGCCGCCTGATGACGGTAGGCGAGATGTCATCCACCCGTCTCGAGCATTGTCAGCGATATGCGGC ATTAGGCGGTGATGAGTTATCCATGACCTTTAATTTCCATCACCTGAAAGTGGATTATCTTAACGGTGAAAAGTGGTCAT TGATGCCGCCGAATCGGGTGGAGTTGAAACACATTTTTAATCAGTGGCAGCAAGGGATGCACAACCGCGCATGGAACGCA CTATTTTGGTGTAATCACGATCAACCACGCATTGTCTCGCGTTTTGGTCATGAAGGCGCACTACGTTTGCCAGCGGCAAA GATGCTGGCGATGGTACTGCACGGTATGCAGGGCACGCCTTATATTTATCAGGGGGAAGAAATTGGCATGACGAACCCCA ATTTCACTGATATCACTCAATACCGTGATGTTGAAAGCCTGAATATGTTTGCCGAACTGAGTGTGGCAGGCCGCGAACCC GATGAGTTATTGGCGATTCTGGCAGCTAAATCCCGTGATAATAGCCGTACCCCCATGCAATGGGATAGCAGCGATAATGC GGGTTTCAGCCAAGGCACTCCCTGGATTGCCCCTTGCAGCAATTATCATGAGATTAACGTTAATGCCGCATTGGCCGACG CTGACTCGGTGTTTTATGCCTATCAATACCTGATAGCCCTGCGTAAACAATACGATATTTTCACTTTCGGTGATTATCAG GATCTTTGCCCACAGCATCCTGATTTATGGTGCTATTTGCGCAGTTGGCAAGGGAAGCAACTGTTGGTAGTCGCTAACCT GAGTGAAGAGCCCCAGCGATGGCAACCCGAGGGCCTCACGCTGGACGGTAATTGGCAATTATTGATGAGCAGCTACGACC AAAGCGCCTTCCAACCGCAAGATATGATATTACGCGGATATGAGGGGATTTATTGGGTATGTGAATAA Protein sequence : MNNPIPWWQHGVIYQIYPKSFQDSTGNGYGDLAGVAQRLDYLQKLGVDAIWLTPVYVSPQVDNGYDVADYCAIDPAYGTL DDFKRLVAGAHQRGIRIIMDMVFNHTSTEHAWFKASQDRNSPYRQFYIWRDGDGGDGSLPNNWRSKFGGHAWQWHAASGQ YYLHLFAPEQADLNWEHQPVRDELKKVCEFWADLGVDGLRLDVINLVSKQQDFPNDLDGDGRRFYTDGPRIHEFLQELSR DVFQPRRLMTVGEMSSTRLEHCQRYAALGGDELSMTFNFHHLKVDYLNGEKWSLMPPNRVELKHIFNQWQQGMHNRAWNA LFWCNHDQPRIVSRFGHEGALRLPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPNFTDITQYRDVESLNMFAELSVAGREP DELLAILAAKSRDNSRTPMQWDSSDNAGFSQGTPWIAPCSNYHEINVNAALADADSVFYAYQYLIALRKQYDIFTFGDYQ DLCPQHPDLWCYLRSWQGKQLLVVANLSEEPQRWQPEGLTLDGNWQLLMSSYDQSAFQPQDMILRGYEGIYWVCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-121 | 45 |
