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Name : YpsIP31758_4105 (YpsIP31758_4105) Accession : YP_001403049.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : pili assembly chaperone protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 4631002 - 4631751 bp Length : 750 bp Strand : - Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGATATGGAGACAACAACGTTTGTGGGCAAAGACAGCGCTATTCGGGATAGCCTTGTGGCTCACTGCGCTAACCAGCCA GGCGGCAATTAACCTGGATCGGACACGTATTATCTTTAATAGTACTGATAAATCAGCCAGTGTTATTTTGCAAAACCAGA GCCCGTCATCACCTTATTTGGCGCAATCTTGGTTGGAAAATACCAAAGGCCAAAAAATAGAGAGTCCATTGGTGGCTTTA CCCCCTATGCAGCGGATTGATGCCGGGCAAAAAAGCCAGGTTCGGATCATGAAACTACCGGATGCCGATAAATTACCCAC TGATCGCGAGACATTATTCTATTTCAATGTGCGGGAAATCCCACCGCAAAGCGAAATGAATAATGTCGTACAAATTGCGA TTCAAAATCGGATAAAGCTGTTTTATCGGCCCATGGCTATCAAAGCGAATTATAGCGATATCTGGCAAGAGAAATTACAG ATCAGTAAACAAGTGGGGGGGCTTAAAATTAATAACCCTACACCTTATTACATTACGTTGGCTTATTTGAGTCAGAATGA ACAAGGTAACTTTCCTGGTTTTGACAGCGTCATGATTGCGCCTTTTGGTACTGAGTTTGTTAAAACGCCGGGTTATAGCG GTAGCCGTTATAATGTTGGTTATATGGATGATTTTGGGGGCATTGTGATACGCACTTTTAACTGTTTATCAGCAGAATGC CAAATTCAGCCAGCTGAAAAGAGAAGGTGA Protein sequence : MIWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLAQSWLENTKGQKIESPLVAL PPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREIPPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDIWQEKLQ ISKQVGGLKINNPTPYYITLAYLSQNEQGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFNCLSAEC QIQPAEKRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 5e-43 | 48 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-50 | 46 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-50 | 44 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-51 | 43 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-51 | 43 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-51 | 43 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-51 | 43 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-51 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YpsIP31758_4105 | YP_001403049.1 | pili assembly chaperone protein | VFG0885 | Protein | 2e-43 | 48 |
| YpsIP31758_4105 | YP_001403049.1 | pili assembly chaperone protein | VFG1547 | Protein | 8e-51 | 44 |
| YpsIP31758_4105 | YP_001403049.1 | pili assembly chaperone protein | VFG0896 | Protein | 7e-52 | 43 |
