Gene Information

Name : YpsIP31758_3833 (YpsIP31758_3833)
Accession : YP_001402787.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator EsrB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4314503 - 4315135 bp
Length : 633 bp
Strand : +
Note : identified by similarity to GB:AAX76904.1; match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence : 
ATGAATACTAAATTATTGATTGTCGACGATCATGAACTCATTATTCATGGCATCAAGAATATGCTGGCCGCCTATCCGCG
CTACCTGATTGTAGGCCAAGCGGATAATGGACTTGAAGTGTATAACTTGTGCCGCCAAACTGAACCTGACATGGTCATTC
TGGATTTAGGATTACCCGGTATGGATGGCCTTGATGTTATCATTCAGTTGCTTCGCCGTTGGCCAGCGATGAAGATCCTG
ACGTTAACCGCCCGCAATGAAGAACACTATGCCAGCAGAACATTCAACAGTGGAGCCTTAGGCTATGTGCTGAAGAAAAG
TCCCCAGCAAATCCTGATGGCAGCCATTCAAACCGTCGCAATAGGCAAACGTTATATTGACCCCGCCCTTGATGCCTCTA
TGGTAATAAAACTGACTCAAGGATCCGATAATACGCCCCCGGTTCTGACACCCCGCGAGCGGCAGATATTAAAACTTATC
ACCGAGGGATCGTGTAATCGGGTTATTGCTGCTCAACTTTCTATCAGCCAAAAAACTGTCGAAACACATCGGTTGAATAT
GATGAAAAAATTGGATGTACATAAAGTCGCAGAACTTATTCACTGGTCATACCGATTAGGCTTGAATGTCTAA

Protein sequence : 
MNTKLLIVDDHELIIHGIKNMLAAYPRYLIVGQADNGLEVYNLCRQTEPDMVILDLGLPGMDGLDVIIQLLRRWPAMKIL
TLTARNEEHYASRTFNSGALGYVLKKSPQQILMAAIQTVAIGKRYIDPALDASMVIKLTQGSDNTPPVLTPRERQILKLI
TEGSCNRVIAAQLSISQKTVETHRLNMMKKLDVHKVAELIHWSYRLGLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 1e-88 99
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 2e-41 56
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 2e-41 56
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-41 56
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 2e-41 56
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 5e-36 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3833 YP_001402787.1 DNA-binding response regulator EsrB VFG0492 Protein 6e-42 56
YpsIP31758_3833 YP_001402787.1 DNA-binding response regulator EsrB VFG2440 Protein 3e-25 41