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Name : epaR (YpsIP31758_3812) Accession : YP_001402766.1 Strain : Yersinia pseudotuberculosis IP 31758 Genome accession: NC_009708 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 4297732 - 4298526 bp Length : 795 bp Strand : - Note : identified by match to protein family HMM PF01311; match to protein family HMM TIGR01401 DNA sequence : ATGACTGACGTCCTCCCCGGTCTGACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACCTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCCGGTTTTCTGATCGATACCTTACGCGGGGCAAC GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT ACCAGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT TTCTGGCGATGCCCATTAAAAGCGCACTGGCACTTTTTCTCTTACTGATCAGCCTGCCTTATGGCCTGCATCACTACCTG TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATCAAAGGGGGGAATGATGTCCACTGA Protein sequence : MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL SRMSDTEQKIGTLIPLIKGGNDVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 4e-105 | 100 |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-44 | 52 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 1e-44 | 52 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 9e-45 | 52 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 2e-44 | 51 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-44 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epaR | YP_001402766.1 | type III secretion apparatus protein SpaR/YscT/HrcT | VFG0521 | Protein | 1e-44 | 51 |
