Gene Information

Name : YpsIP31758_3736 (YpsIP31758_3736)
Accession : YP_001402690.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : pilus biogenesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4211230 - 4212300 bp
Length : 1071 bp
Strand : -
Note : identified by similarity to GB:AAL05516.1

DNA sequence :
ATGGCACAACCAAATCTGCGGCCCAGATATAAGTTGGTATGGCTCACGCTGTTACTGCTAACCGCTGGCTGCACCCATAA
CACTACCGCCCAGTACAAACCGCTTTCACCCGTTCCGCCCATTCCCCGAGTCAATGATATTTACCCCAATCCTGCTCCAG
AGGTTGTGCGCTATGACCGCTATACTCTGATTAGCAGCAAACCTGTTGATGCGCAGCGTGATCCGCTGAACCAAATAATG
GACATCAGCATGCCCGCCGAAATGGTTCGCTCTGTTGGCGATGGCTTTCGATATGTATTGCTGGAATCGGGGTACTCATT
GTGTCCAATATCATCACCGGTTTTTGCCGAACTGCTAAACAAGCCGTTACCTGGGGTTCAACGTTCAATGGGCCCGTTAC
GCCTTAGTGACGCTTTGCAGATCCTTGCGGGACCCGCCTGGCGTTTGCTCGTTGATGATGTTAACCGCGAAGTCTGTTTT
ACATTACGTGATGCCTATCAGAACCTTGTGTCAGCCAAACCGGTAGTGCCAGCCAATGTCATTATCCCTACTAAAAATCT
AGCACAGCAATCTGGAAACCCTTTTTCTGGATCCTCTGCCAGCGCGCTAACACCTGTTGTTCCCACACTTTTAGTACCGC
TTAAACCGACTATAAAGCCTGAAAGTATCTCCATCCCCTCACCCGTATTGACGGAAGCCAGCAAGGTGTTAGCACCGGCT
ACTGCGGTTTTCTCAACTGAAGCGCCAGGTAAAACGGTATCTGGCCCAGGGACGCCGATCTCTGTTGCCCCTTCAGGCCA
GCTTTGGCGGGCCGAGGTAGGCTCAACACTCAAAGAAACGCTGAATCGTTGGGCAGGCCAGAACAAATGTGAGAACGGTG
GCCATTGGGTAGTCATCTGGCCGGTTTTATTGGATTACCGCATTGATGCGCCATTGGCTTTCCACGGCAATTTTGAATAT
GTACTCGTTCAGATTTTTGAGCTTTATCGTCAAGCAGACAAACCCTTGTTTGCGCAAGCCAGCCGCCCGCAATGTCTGGT
CGTGGTTAGCGACATCCCTGGGGGGCTCTGA

Protein sequence :
MAQPNLRPRYKLVWLTLLLLTAGCTHNTTAQYKPLSPVPPIPRVNDIYPNPAPEVVRYDRYTLISSKPVDAQRDPLNQIM
DISMPAEMVRSVGDGFRYVLLESGYSLCPISSPVFAELLNKPLPGVQRSMGPLRLSDALQILAGPAWRLLVDDVNREVCF
TLRDAYQNLVSAKPVVPANVIIPTKNLAQQSGNPFSGSSASALTPVVPTLLVPLKPTIKPESISIPSPVLTEASKVLAPA
TAVFSTEAPGKTVSGPGTPISVAPSGQLWRAEVGSTLKETLNRWAGQNKCENGGHWVVIWPVLLDYRIDAPLAFHGNFEY
VLVQIFELYRQADKPLFAQASRPQCLVVVSDIPGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3736 YP_001402690.1 pilus biogenesis protein Not tested YAPI Protein 3e-152 100
pilL CAF28485.1 putative membrane anchored protein Virulence YAPI Protein 5e-146 96
YE3506 YP_001007668.1 putative type IV pilus operon lipoprotein Virulence YAPI Protein 1e-113 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpsIP31758_3736 YP_001402690.1 pilus biogenesis protein VFG2308 Protein 5e-114 75